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Comment: Comment: Error when trying to create a heatmap with DESeq2
5 months ago by kashiff007 ★ 1.9k
0
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1
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1.0k
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Comment: Comment: I want to merge gene sequences in fasta to create one genome from all cds region
15 months ago by kashiff007 ★ 1.9k
1
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1
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761
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Comment: Comment: Trim contamined reads for RNA-seq
15 months ago by kashiff007 ★ 1.9k
0
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1
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631
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Comment: Comment: Comparing expression of DEG gene in samples
23 months ago by kashiff007 ★ 1.9k
1
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0
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2.0k
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Comment: Comment: Same sequencing sample in multiple lanes. How to analyse it?
2.2 years ago by kashiff007 ★ 1.9k
1
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1
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2.0k
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Comment: Comment: Same sequencing sample in multiple lanes. How to analyse it?
2.2 years ago by kashiff007 ★ 1.9k
0
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2
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955
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Comment: Comment: VariantsToTable not produce output file
2.2 years ago by kashiff007 ★ 1.9k
1
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1
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821
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Comment: Comment: fastq-dump command
2.2 years ago by kashiff007 ★ 1.9k
1
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1
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1.7k
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Comment: Comment: bedGraphtoBigWig- Converting INSDC chromosome names to UCSC names
2.2 years ago by kashiff007 ★ 1.9k
1
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0
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565
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Comment: Comment: sequence splitting
2.2 years ago by kashiff007 ★ 1.9k
0
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1
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821
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Comment: Comment: fastq-dump command
2.2 years ago by kashiff007 ★ 1.9k
3
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1
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949
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Comment: Comment: RNASeq deseq2
2.2 years ago by kashiff007 ★ 1.9k
1
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1
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1.2k
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Comment: Comment: AnnotationForge and Error in FUN(X[[i]], ...) : data.frames in '...' cannot c
2.2 years ago by kashiff007 ★ 1.9k
1
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1
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1.1k
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Comment: Comment: Filtering Gene by mean expression
2.4 years ago by kashiff007 ★ 1.9k
2
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1
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1.8k
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Comment: Comment: featureCounts fragment count
2.4 years ago by kashiff007 ★ 1.9k
2
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1
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9.5k
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Comment: Comment: heatmap by r studio
2.4 years ago by kashiff007 ★ 1.9k
3
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0
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1.6k
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Comment: Comment: Extract information from prokka gff files
2.4 years ago by kashiff007 ★ 1.9k
3
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1
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2.0k
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Comment: Comment: How to get/calculate coverage of a gene using bed file?
2.4 years ago by kashiff007 ★ 1.9k
3
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2
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3.6k
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Comment: Comment: using rsem sample.genome.STAR.genome.bam for calculating expression
2.5 years ago by kashiff007 ★ 1.9k
3
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1
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2.0k
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Comment: Comment: How to get/calculate coverage of a gene using bed file?
2.5 years ago by kashiff007 ★ 1.9k
2
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0
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619
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Comment: Comment: Sorting .bed file by genes size
2.5 years ago by kashiff007 ★ 1.9k
0
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0
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889
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Comment: Comment: ChIP-seq analysis differential peak analysis regarding spike-in
2.5 years ago by kashiff007 ★ 1.9k
3
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0
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1.0k
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Comment: Comment: Heatmap when having duplicated genes and samples
2.5 years ago by kashiff007 ★ 1.9k
0
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1
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1.0k
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Comment: Comment: Heatmap when having duplicated genes and samples
2.5 years ago by kashiff007 ★ 1.9k
1
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1
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2.9k
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Comment: Comment: Where Does The Pvalue Comes From In Macs14
2.8 years ago by kashiff007 ★ 1.9k
1
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1
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1.5k
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Comment: C: Extract last exon annotation from each mRNA
4.1 years ago by kashiff007 ★ 1.9k
2
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0
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1.5k
views
Comment: C: Extract last exon annotation from each mRNA
4.1 years ago by kashiff007 ★ 1.9k
1
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1
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1.5k
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Comment: C: Extract last exon annotation from each mRNA
4.1 years ago by kashiff007 ★ 1.9k
1
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0
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8.7k
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Comment: C: Interpreting Bismark Methylation Extractor output
4.2 years ago by kashiff007 ★ 1.9k
2
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0
replies
1.9k
views
Comment: C: Plot read density across a normalized gene model for its each exon/intron length
4.4 years ago by kashiff007 ★ 1.9k
2
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0
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1.9k
views
Comment: C: Plot read density across a normalized gene model for its each exon/intron length
4.4 years ago by kashiff007 ★ 1.9k
1
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0
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31k
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Comment: C: Converstion of BED with scores into bigWig
updated 4.5 years ago by 43k • written 6.6 years ago by ★ 1.9k
1
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0
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3.1k
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Comment: C: Error :creating a custom BS genome pakage for Olea Europeae
4.6 years ago by kashiff007 ★ 1.9k
1
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1
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1.1k
views
Comment: C: Reporting methylation of both Cs and Gs, or only Cs
4.7 years ago by kashiff007 ★ 1.9k
1
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1
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3.5k
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Comment: C: plot error x y length difference
4.8 years ago by kashiff007 ★ 1.9k
1
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1
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1.6k
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Comment: C: macs14 replicates treatment and final wiggle peak files
4.9 years ago by kashiff007 ★ 1.9k
1
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1
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1.6k
views
Comment: C: macs14 replicates treatment and final wiggle peak files
4.9 years ago by kashiff007 ★ 1.9k
1
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0
replies
1.6k
views
Comment: C: Number of discovered genes in genome does not correspond with published annotati
5.2 years ago by kashiff007 ★ 1.9k
1
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1
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1.6k
views
Comment: C: Number of discovered genes in genome does not correspond with published annotati
5.2 years ago by kashiff007 ★ 1.9k
1
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1
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1.6k
views
Comment: A: Number of discovered genes in genome does not correspond with published annotati
5.2 years ago by kashiff007 ★ 1.9k
1
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0
replies
1.2k
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Comment: C: How to subset S4 list with 5 Granges elements
5.2 years ago by kashiff007 ★ 1.9k
4
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0
replies
3.2k
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Comment: C: Multiple sequence alignment and visualisation for bacterial genomes
5.2 years ago by kashiff007 ★ 1.9k
1
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0
replies
4.3k
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Comment: C: Finding Minisatellite Repeat Motives In Dna
5.9 years ago by kashiff007 ★ 1.9k
1
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0
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9.9k
views
Comment: C: How to extract bigWig signal for a given bed file?
6.1 years ago by kashiff007 ★ 1.9k
1
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1
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9.9k
views
Comment: C: How to extract bigWig signal for a given bed file?
6.1 years ago by kashiff007 ★ 1.9k
1
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1
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9.9k
views
Comment: C: How to extract bigWig signal for a given bed file?
6.2 years ago by kashiff007 ★ 1.9k
2
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2
replies
7.1k
views
Comment: C: MCScanX result problem
6.6 years ago by kashiff007 ★ 1.9k
1
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1
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7.1k
views
Comment: C: MCScanX result problem
6.6 years ago by kashiff007 ★ 1.9k
1
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0
replies
1.5k
views
Comment: C: Compare mus musculus and mus spretus genome structure annotation
6.6 years ago by kashiff007 ★ 1.9k
1
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1
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7.1k
views
Comment: C: MCScanX result problem
6.6 years ago by kashiff007 ★ 1.9k
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