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questions
2
votes
1
reply
188
views
Seurat merge and batch correction
Seurat
updated 1 day ago by
Ram
43k • written 2 days ago by
sooni
▴ 20
0
votes
0
replies
252
views
batch correction: cds from seurat
batch-correction
R
seurat
monocle3
cds
updated 16 days ago by
Ram
43k • written 16 days ago by
sooni
▴ 20
0
votes
3
replies
286
views
convert cds to seurat object
R
monocle3
seurat
updated 28 days ago by
edoardofilippi1998
• 0 • written 29 days ago by
sooni
▴ 20
0
votes
2
replies
228
views
DEG (Differential expression gene) analysis
DEG
R
updated 5 weeks ago by
dsull
★ 5.8k • written 5 weeks ago by
sooni
▴ 20
3
votes
10
replies
776
views
t-test in two groups, multiple rows
R
t-test
5 weeks ago by
sooni
▴ 20
4
votes
2
replies
309
views
no permission to install to directory
R
updated 6 weeks ago by
Ram
43k • written 7 weeks ago by
sooni
▴ 20
1
vote
1
reply
299
views
shotgun metagenomics degs analysis
deg
degs
shotgun
updated 9 weeks ago by
colindaven
6.4k • written 9 weeks ago by
sooni
▴ 20
0
votes
0
replies
168
views
KEGG orthology ID to E. coli gene symbol
symbol
KEGG
convert
3 months ago by
sooni
▴ 20
1
vote
3
replies
430
views
How to check a specific gene level in a specific genus?
microbiome
updated 3 months ago by
inedraylig
▴ 60 • written 3 months ago by
sooni
▴ 20
2
votes
5
replies
627
views
How to install MetaPhlAn3?
MetaPhlAn3
updated 3 months ago by
Philipp Bayer
8.3k • written 3 months ago by
sooni
▴ 20
1
vote
1
reply
417
views
DIAMOND tutorial
tutorial
DIAMOND
updated 4 months ago by
GenoMax
141k • written 4 months ago by
sooni
▴ 20
3
votes
2
replies
397
views
t-test by row
R
t-test
updated 5 months ago by
dthorbur
★ 1.9k • written 5 months ago by
sooni
▴ 20
0
votes
3
replies
588
views
Download NCBI data using sratoolkit in anaconda
NCBI
sratoolkit
anaconda
updated 6 months ago by
Ram
43k • written 6 months ago by
sooni
▴ 20
0
votes
0
replies
321
views
tidy_vcf function
tidy_vcf
manhattan
vcf
updated 6 months ago by
Pierre Lindenbaum
161k • written 6 months ago by
sooni
▴ 20
3
votes
3
replies
705
views
vcf.gz to vcf
VCF
updated 6 months ago by
Mark
★ 1.5k • written 6 months ago by
sooni
▴ 20
1
vote
1
reply
404
views
GWAS phenotype
R
GWAS
phenotype
updated 7 months ago by
dthorbur
★ 1.9k • written 7 months ago by
sooni
▴ 20
0
votes
5
replies
865
views
manhattan plot with vcf information
R
manhattan
vcf
updated 7 months ago by
dthorbur
★ 1.9k • written 7 months ago by
sooni
▴ 20
0
votes
0
replies
276
views
Install packages in old version Julia
package
Julia
7 months ago by
sooni
▴ 20
0
votes
1
reply
378
views
prediction dead time within 24 hours with TPM-rna seq data
Python
CYCLOPS
R
Julia
updated 7 months ago by
Ram
43k • written 7 months ago by
sooni
▴ 20
0
votes
4
replies
939
views
matching gnomAD allele frequency
R
python
gnomAD
8 months ago by
sooni
▴ 20
0
votes
2
replies
407
views
python 'gnomAD_DB'
gnomAD_DB
python
9 months ago by
sooni
▴ 20
3
votes
3
replies
1.2k
views
Is there any way to access gnomAD data from R?
R
gnomAD
updated 9 months ago by
Ming Tommy Tang
★ 3.9k • written 10 months ago by
sooni
▴ 20
2
votes
4
replies
1.1k
views
After R studio update, restrict view of columns in dataframe.
Rstudio
dataframe
R
updated 9 months ago by
Ming Tommy Tang
★ 3.9k • written 10 months ago by
sooni
▴ 20
2
votes
1
reply
3.9k
views
Seurat 'DoHeatmap()' hierarchical clustering
DoHeatmap
Seurat
clustering
updated 11 months ago by
fracarb8
★ 1.6k • written 11 months ago by
sooni
▴ 20
0
votes
0
replies
367
views
single cell RNA analysis in python
cell
single
python
11 months ago by
sooni
▴ 20
3
votes
4
replies
1.3k
views
How to convert chromosome locations to gene symbols?
symbol
location
chromosome
gene
updated 11 months ago by
Trivas
★ 1.7k • written 11 months ago by
sooni
▴ 20
2
votes
1
reply
415
views
'Seurat' package
Seurat
R
updated 11 months ago by
Ram
43k • written 11 months ago by
sooni
▴ 20
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