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2
votes
2
replies
2.5k
views
comparing variants between two VCF files
VCF SV BED
updated 3.7 years ago by 23k • written 3.7 years ago by ▴ 140
0
votes
0
replies
3.7k
views
Comment: Comment: Downloading all runs using fastq-dump
3.9 years ago by BDK_compbio ▴ 140
0
votes
1
reply
3.7k
views
Comment: Comment: Downloading all runs using fastq-dump
3.9 years ago by BDK_compbio ▴ 140
0
votes
6
replies
3.7k
views
Downloading all runs using fastq-dump
fastq-dump SRAtoolkit
updated 3.9 years ago by ▴ 90 • written 4.0 years ago by ▴ 140
0
votes
0
replies
1.9k
views
grouping in EdgeR
EdgeR RNA-SEQ
4.1 years ago by BDK_compbio ▴ 140
3
votes
1
reply
3.4k
views
Running IsoSeq pipeline
PacBio IsoSeq
updated 4.6 years ago by 20 • written 6.6 years ago by ▴ 140
0
votes
0
replies
746
views
Extract Info from chromosome locations
Chromosome gene
5.1 years ago by BDK_compbio ▴ 140
2
votes
3
replies
3.2k
views
Whole Genome Alignment for plant genomes
alignment WGA
updated 5.1 years ago by ▴ 20 • written 8.7 years ago by ▴ 140
7
votes
7
replies
3.2k
views
CD-HIT Clustering evaluation
CD-HIT Clustering RNA-Seq sequencing
updated 3.6 years ago by • 0 • written 5.2 years ago by ▴ 140
0
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1
reply
3.2k
views
Comment: C: CD-HIT Clustering evaluation
5.2 years ago by BDK_compbio ▴ 140
0
votes
0
replies
1.2k
views
Comment: C: Download all isoforms
5.2 years ago by BDK_compbio ▴ 140
0
votes
0
replies
1.2k
views
Comment: C: Download all isoforms
5.2 years ago by BDK_compbio ▴ 140
0
votes
4
replies
1.2k
views
Download all isoforms
isoform sequence
5.2 years ago by BDK_compbio ▴ 140
0
votes
0
replies
3.2k
views
Comment: C: CD-HIT Clustering evaluation
5.2 years ago by BDK_compbio ▴ 140
0
votes
0
replies
3.2k
views
Comment: C: CD-HIT Clustering evaluation
5.2 years ago by BDK_compbio ▴ 140
16
votes
19
replies
13k
views
8 follow
Mismatch and Indel statistics from BAM/SAM file
SAM BAM Indel
updated 6.4 years ago by ▴ 260 • written 8.0 years ago by ▴ 140
0
votes
1
reply
179k
views
Comment: C: Blast - Formatting Output
6.5 years ago by BDK_compbio ▴ 140
1
vote
0
replies
1.6k
views
sequence alignment using edlib c++ library
cpp alignment
updated 24 months ago by 45k • written 6.8 years ago by ▴ 140
0
votes
0
replies
1.3k
views
Running DSK for multiple k values
k-mer
6.9 years ago by BDK_compbio ▴ 140
0
votes
0
replies
1.2k
views
Running k-mer counting tool DSK with multiple k values
sequence k-mer
7.0 years ago by BDK_compbio ▴ 140
0
votes
0
replies
1.4k
views
Comment: C: Consensus by aligning and extending the sequences
7.7 years ago by BDK_compbio ▴ 140
0
votes
2
replies
1.4k
views
Consensus by aligning and extending the sequences
fasta msa alignment
updated 7.7 years ago by 35k • written 7.7 years ago by ▴ 140
0
votes
0
replies
13k
views
Comment: C: Mismatch and Indel statistics from BAM/SAM file
7.7 years ago by BDK_compbio ▴ 140
0
votes
0
replies
13k
views
Comment: C: Mismatch and Indel statistics from BAM/SAM file
7.7 years ago by BDK_compbio ▴ 140
0
votes
0
replies
13k
views
Comment: C: Mismatch and Indel statistics from BAM/SAM file
updated 7.7 years ago by 151k • written 7.7 years ago by ▴ 140
1
vote
1
reply
2.9k
views
Mismatch and Indel rate in alignment
alignment sam bam
updated 7.7 years ago by ▴ 720 • written 7.7 years ago by ▴ 140
0
votes
1
reply
13k
views
Comment: C: Mismatch and Indel statistics from BAM/SAM file
7.7 years ago by BDK_compbio ▴ 140
0
votes
1
reply
13k
views
Comment: C: Mismatch and Indel statistics from BAM/SAM file
7.7 years ago by BDK_compbio ▴ 140
0
votes
0
replies
2.1k
views
Comment: C: Finding conserved non-coding sequences
7.8 years ago by BDK_compbio ▴ 140
0
votes
0
replies
2.3k
views
Comment: C: Finding Ultraconserved elements between human and zebrafish
7.8 years ago by BDK_compbio ▴ 140
0
votes
1
reply
13k
views
Comment: C: Mismatch and Indel statistics from BAM/SAM file
8.0 years ago by BDK_compbio ▴ 140
2
votes
1
reply
6.1k
views
Extract the mapped contig sequences from SAM/BAM file
samtools bwa BAM SAM
updated 8.2 years ago by ▴ 290 • written 8.2 years ago by ▴ 140
3
votes
8
replies
18k
views
Tophat Error : Couldn't build bowtie index with err = 1
RNA-Seq bowtie tophat
updated 2.9 years ago by 45k • written 10.4 years ago by ▴ 140
0
votes
0
replies
6.7k
views
Comment: Comment: Protein Sequence Clustering (CD-HIT vs BLASTClust + Problems in BlastClust)
updated 2.6 years ago by 45k • written 9.8 years ago by ▴ 140
0
votes
0
replies
6.7k
views
Answer: Answer: Protein Sequence Clustering (CD-HIT vs BLASTClust + Problems in BlastClust)
updated 2.6 years ago by 45k • written 9.8 years ago by ▴ 140
0
votes
4
replies
6.7k
views
Protein Sequence Clustering (CD-HIT vs BLASTClust + Problems in BlastClust)
BlastClust Clustering blast CD-HIT
updated 2.6 years ago by 45k • written 9.8 years ago by ▴ 140
0
votes
1
reply
9.4k
views
Comment: Comment: cufflink and cuffmerge error
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 140
0
votes
1
reply
9.4k
views
Comment: Comment: cufflink and cuffmerge error
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 140
0
votes
0
replies
3.6k
views
Comment: Comment: Sequence Alignment Visualization
updated 3.2 years ago by 45k • written 10.4 years ago by ▴ 140
0
votes
1
reply
3.6k
views
Comment: Comment: Sequence Alignment Visualization
updated 3.2 years ago by 45k • written 10.4 years ago by ▴ 140
0
votes
1
reply
18k
views
Comment: Comment: Tophat Error : Couldn't build bowtie index with err = 1
updated 3.2 years ago by 45k • written 10.4 years ago by ▴ 140
2
votes
6
replies
3.6k
views
Sequence Alignment Visualization
alignment sequence
updated 3.2 years ago by 45k • written 10.4 years ago by ▴ 140
0
votes
1
reply
3.6k
views
Comment: Comment: Sequence Alignment Visualization
updated 3.2 years ago by 45k • written 10.4 years ago by ▴ 140
1
vote
0
replies
4.3k
views
Answer: Answer: clustering and assembly
updated 3.2 years ago by 45k • written 10.4 years ago by ▴ 140
0
votes
1
reply
11k
views
Comment: Comment: Tophat with Bowtie2 long index
updated 3.4 years ago by 45k • written 10.7 years ago by ▴ 140
0
votes
0
replies
11k
views
Comment: C: Tophat with Bowtie2 long index
10.7 years ago by BDK_compbio ▴ 140
0
votes
1
reply
11k
views
Comment: Comment: Tophat with Bowtie2 long index
updated 3.4 years ago by 45k • written 10.7 years ago by ▴ 140
2
votes
16
replies
11k
views
Tophat with Bowtie2 long index
tophat bowtie
updated 3.4 years ago by 45k • written 10.9 years ago by ▴ 140
0
votes
0
replies
11k
views
Comment: C: Tophat with Bowtie2 long index
10.8 years ago by BDK_compbio ▴ 140
0
votes
0
replies
11k
views
Comment: C: Tophat with Bowtie2 long index
10.8 years ago by BDK_compbio ▴ 140
58 results • Page 1 of 2
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