Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
3.7k
views
Comment: C: Fixing BAM file errors reported by Picard ValidateSamFile, and in featureCounts'
5.4 years ago by Juke34 9.3k
1
vote
0
replies
1.3k
views
Answer: A: Eucaryotic gene predictor within eucaryote genome
5.4 years ago by Juke34 9.3k
0
votes
0
replies
18k
views
Comment: A: ERROR: failed to find the gene identifier attribute in the 9th column of the pro
5.4 years ago by Juke34 9.3k
0
votes
1
reply
3.7k
views
Answer: A: Split multi-fasta file into smaller files using R
5.4 years ago by Juke34 9.3k
0
votes
1
reply
3.3k
views
Answer: A: How to make TE gtf file from gff3 for TEtranscripts reference?
5.4 years ago by Juke34 9.3k
1
vote
0
replies
1.1k
views
Comment: C: Maker gene prediction error
5.4 years ago by Juke34 9.3k
0
votes
1
reply
1.7k
views
Answer: A: Using genome tools to convert bed files to gff3 files
5.4 years ago by Juke34 9.3k
0
votes
1
reply
2.8k
views
Comment: C: Simple genome annotation using transcripts data
5.4 years ago by Juke34 9.3k
0
votes
0
replies
2.8k
views
Comment: C: Simple genome annotation using transcripts data
5.4 years ago by Juke34 9.3k
0
votes
1
reply
2.8k
views
Comment: C: Simple genome annotation using transcripts data
5.4 years ago by Juke34 9.3k
0
votes
1
reply
14k
views
Comment: C: Create de novo repeat library
5.4 years ago by Juke34 9.3k
1
vote
1
reply
2.8k
views
Comment: C: Simple genome annotation using transcripts data
5.4 years ago by Juke34 9.3k
0
votes
1
reply
14k
views
Comment: C: Create de novo repeat library
5.4 years ago by Juke34 9.3k
1
vote
1
reply
2.8k
views
Comment: C: Simple genome annotation using transcripts data
5.4 years ago by Juke34 9.3k
1
vote
1
reply
1.9k
views
Comment: C: Different length returned by featureCounts and seqtk comp and AGAT
5.4 years ago by Juke34 9.3k
0
votes
2
replies
1.5k
views
Comment: C: maker tool get stucks forever
5.4 years ago by Juke34 9.3k
2
votes
1
reply
2.9k
views
Comment: C: Detect discrepancies in GFF files
5.4 years ago by Juke34 9.3k
0
votes
0
replies
2.0k
views
Comment: C: intersection of two GFFs
5.4 years ago by Juke34 9.3k
0
votes
0
replies
2.0k
views
Comment: C: intersection of two GFFs
5.4 years ago by Juke34 9.3k
0
votes
1
reply
2.1k
views
Comment: C: Elloreas, a new genome assembler
5.4 years ago by Juke34 9.3k
0
votes
1
reply
1.5k
views
Comment: C: maker tool get stucks forever
5.4 years ago by Juke34 9.3k
0
votes
1
reply
3.6k
views
Comment: C: FASTA file split
5.4 years ago by Juke34 9.3k
12
votes
5
replies
3.6k
views
Tutorial: FASTA file split
fasta
updated 2.7 years ago by 45k • written 5.4 years ago by 9.3k
1
vote
1
reply
2.9k
views
Comment: C: De Novo Assembly - GTF/GFF File
5.4 years ago by Juke34 9.3k
2
votes
1
reply
3.3k
views
Comment: C: Extracting features from .gff3 file based on position
updated 5.4 years ago by 45k • written 5.4 years ago by 9.3k
1
vote
1
reply
1.3k
views
Comment: C: GenSAS merged annotation GFF3 file to NCBI .sqn file for NCBI genome submission
5.4 years ago by Juke34 9.3k
1
vote
1
reply
2.9k
views
Comment: C: De Novo Assembly - GTF/GFF File
5.4 years ago by Juke34 9.3k
0
votes
1
reply
1.8k
views
Comment: C: Gffcompare issue: 0 reference transcripts loaded
5.4 years ago by Juke34 9.3k
0
votes
1
reply
1.8k
views
Comment: C: Gffcompare issue: 0 reference transcripts loaded
5.4 years ago by Juke34 9.3k
1
vote
0
replies
1.6k
views
Comment: C: Filtering Augustus GTF based on protein sequence
5.4 years ago by Juke34 9.3k
0
votes
1
reply
3.5k
views
Answer: A: Correct gtf file format (AGAT toolkit)
5.4 years ago by Juke34 9.3k
3
votes
1
reply
11k
views
Comment: C: First time using maker
5.4 years ago by Juke34 9.3k
1
vote
1
reply
3.0k
views
Answer: A: How to make annotation (GFF/GTF) for transcriptome?
5.4 years ago by Juke34 9.3k
0
votes
0
replies
3.4k
views
Comment: C: GFF3 file incompatibilities (source: BRAD)
5.5 years ago by Juke34 9.3k
0
votes
1
reply
3.4k
views
Comment: C: GFF3 file incompatibilities (source: BRAD)
5.5 years ago by Juke34 9.3k
0
votes
1
reply
2.2k
views
Comment: C: Gffread_How to obtain fasta files of gene features (ORF, UTR) by transcripts bas
5.5 years ago by Juke34 9.3k
0
votes
0
replies
2.1k
views
Comment: C: Improving reference gtf annotation via merging with alternative gtf annotations
5.5 years ago by Juke34 9.3k
2
votes
0
replies
2.3k
views
Answer: A: How to extract sequence of a specific feature in gff
5.5 years ago by Juke34 9.3k
2
votes
1
reply
2.1k
views
Answer: A: Improving reference gtf annotation via merging with alternative gtf annotations
5.5 years ago by Juke34 9.3k
3
votes
0
replies
18k
views
Comment: Comment: How To Merge Gff Files
5.5 years ago by Juke34 9.3k
2
votes
0
replies
2.2k
views
Comment: C: [Title Edited] How to update the GFF3 wrong file? [was:] featureCounts may be ig
5.5 years ago by Juke34 9.3k
4
votes
1
reply
2.2k
views
Answer: A: featureCounts may be ignore chloroplast sequences in a plant genome when use -t
5.5 years ago by Juke34 9.3k
0
votes
1
reply
2.9k
views
Answer: A: Make a GFF-file compatible for reference database
5.5 years ago by Juke34 9.3k
5
votes
1
reply
3.3k
views
Answer: Answer: GTF to GFF conversion
4.3 years ago by Juke34 9.3k
2
votes
2
replies
6.2k
views
Answer: A: Sort gff3 on chromosome, position and then featuretype (gene, mRNA, exon, CDS)
5.5 years ago by Juke34 9.3k
0
votes
0
replies
1.2k
views
Comment: C: Trimming Augustus coding sequences to first reading frame
5.5 years ago by Juke34 9.3k
0
votes
1
reply
1.2k
views
Comment: C: Trimming Augustus coding sequences to first reading frame
5.5 years ago by Juke34 9.3k
1
vote
1
reply
3.4k
views
Answer: A: Gene prediction programs predicting different genes
5.5 years ago by Juke34 9.3k
0
votes
0
replies
6.2k
views
Comment: C: Sort gff3 on chromosome, position and then featuretype (gene, mRNA, exon, CDS)
5.5 years ago by Juke34 9.3k
0
votes
1
reply
4.3k
views
Comment: C: UCSC track hub: how to best include a GTF / GFF file
5.5 years ago by Juke34 9.3k
1,001 results • Page 10 of 21
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6