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Comment: C: Sort gff3 on chromosome, position and then featuretype (gene, mRNA, exon, CDS)
5.5 years ago by Juke34 9.3k
1
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6.2k
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Comment: C: Sort gff3 on chromosome, position and then featuretype (gene, mRNA, exon, CDS)
5.5 years ago by Juke34 9.3k
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Answer: A: Extract fasta sequences based on ids file
5.5 years ago by Juke34 9.3k
3
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4.3k
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Answer: A: Which programming langauge shall I start as a beginner in Bioinformatics
5.5 years ago by Juke34 9.3k
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Comment: C: Convert .Gff3 File To 12-Column .Bed File
5.5 years ago by Juke34 9.3k
6
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Answer: A: Convert .Gff3 File To 12-Column .Bed File
5.5 years ago by Juke34 9.3k
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3.7k
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Answer: A: Is there any online course for bioinformatics right now or in the next two or th
5.5 years ago by Juke34 9.3k
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1.9k
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Comment: C: Different length returned by featureCounts and seqtk comp and AGAT
5.5 years ago by Juke34 9.3k
2
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1.9k
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Answer: A: Different length returned by featureCounts and seqtk comp and AGAT
5.5 years ago by Juke34 9.3k
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1
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2.1k
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Answer: A: Conversion GFF to GTF for specific non-model genome
5.5 years ago by Juke34 9.3k
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1
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4.1k
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Comment: C: submit Mitochondria to ENA
5.5 years ago by Juke34 9.3k
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4.1k
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Answer: A: submit Mitochondria to ENA
5.5 years ago by Juke34 9.3k
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1
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4.1k
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Comment: A: submit Mitochondria to ENA
5.5 years ago by Juke34 9.3k
7
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1
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6.0k
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Answer: A: How to make an intronic GTF for alignment
5.5 years ago by Juke34 9.3k
4
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15k
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Answer: A: Genome assembly statistical tools
5.5 years ago by Juke34 9.3k
2
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1
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1.6k
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Answer: A: Extract EXON fasta from a GFF3 annotation and reference genome
5.6 years ago by Juke34 9.3k
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14k
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Comment: C: Create de novo repeat library
5.6 years ago by Juke34 9.3k
1
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1.4k
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Comment: C: What programs can be used to predict all of the coding sequences in a eukaryotic
5.6 years ago by Juke34 9.3k
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14k
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Comment: C: Create de novo repeat library
5.6 years ago by Juke34 9.3k
1
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11k
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Answer: A: Difference between Ensembl annotation GTF and GFF3 files
5.6 years ago by Juke34 9.3k
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1.9k
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Comment: C: Ensembl and Gene Prediction Tools output CDS' not divisible by 3
5.6 years ago by Juke34 9.3k
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1
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2.5k
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Comment: C: EBI submission and AGP ?
5.6 years ago by Juke34 9.3k
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1
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2.5k
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Comment: C: EBI submission and AGP ?
5.6 years ago by Juke34 9.3k
1
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1
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2.4k
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Comment: C: StringTie output to train Augustus
5.6 years ago by Juke34 9.3k
2
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1
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1.9k
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Answer: A: Ensembl and Gene Prediction Tools output CDS' not divisible by 3
5.6 years ago by Juke34 9.3k
1
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1
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2.4k
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Comment: C: StringTie output to train Augustus
5.6 years ago by Juke34 9.3k
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1
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10k
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Answer: A: gene set filter/selection for training ab initio annotation tools
5.6 years ago by Juke34 9.3k
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0
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10k
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Comment: C: gene set filter/selection for training ab initio annotation tools
5.6 years ago by Juke34 9.3k
3
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1
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3.1k
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Answer: A: How can I transfer gene models to a new assembly?
5.6 years ago by Juke34 9.3k
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1
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14k
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Comment: C: Create de novo repeat library
5.6 years ago by Juke34 9.3k
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0
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1.7k
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Comment: C: Repeatmodeler keeps dying
5.6 years ago by Juke34 9.3k
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2.5k
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Comment: C: Where to upload protein coding gene annotation ?
5.6 years ago by Juke34 9.3k
4
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2.5k
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Answer: A: Where to upload protein coding gene annotation ?
5.6 years ago by Juke34 9.3k
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1
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5.1k
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Comment: C: Less and less genes predicted with each iteration of SNAP/MAKER
5.6 years ago by Juke34 9.3k
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1
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5.1k
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Comment: C: Less and less genes predicted with each iteration of SNAP/MAKER
5.6 years ago by Juke34 9.3k
1
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1
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5.1k
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Comment: C: Less and less genes predicted with each iteration of SNAP/MAKER
5.6 years ago by Juke34 9.3k
1
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3
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5.1k
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Comment: C: Less and less genes predicted with each iteration of SNAP/MAKER
5.6 years ago by Juke34 9.3k
0
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0
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5.1k
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Comment: C: Less and less genes predicted with each iteration of SNAP/MAKER
5.6 years ago by Juke34 9.3k
0
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1
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1.9k
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Answer: C: Maker_functional_gff error "Can't use string ("") as a HASH ref"
5.6 years ago by Juke34 9.3k
3
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0
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2.9k
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Answer: A: Sequencing PHRED quality confusion
5.6 years ago by Juke34 9.3k
0
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1
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14k
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Comment: C: Create de novo repeat library
5.6 years ago by Juke34 9.3k
3
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2
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129k
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Answer: A: Convertion Of Gff3 To Gtf
5.7 years ago by Juke34 9.3k
2
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0
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2.3k
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Answer: A: Repeats detection in a genome
5.7 years ago by Juke34 9.3k
0
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0
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10k
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Comment: C: Converting GFF to GTF
5.7 years ago by Juke34 9.3k
0
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1
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1.1k
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Falcon-Phase second round for scaffolding
HiC scaffolding falcon
5.7 years ago by Juke34 9.3k
0
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1.1k
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Answer: A: Falcon-Phase second round for scaffolding
5.7 years ago by Juke34 9.3k
6
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5
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10k
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Forum: Converting GFF to GTF
GTF GFF
updated 2.4 years ago by 45k • written 5.7 years ago by 9.3k
3
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13k
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Answer: A: converting .gff file to .gtf
5.7 years ago by Juke34 9.3k
3
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1
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13k
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Answer: A: converting .gff file to .gtf
5.7 years ago by Juke34 9.3k
0
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1
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6.7k
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Comment: Comment: How to annotate eukaryotic genome
16 months ago by Juke34 9.3k
1,001 results • Page 11 of 21
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