Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
3.5k
views
Comment: C: How can you measure the completeness of an annotation process?
5.0 years ago by Juke34 9.3k
0
votes
1
reply
1.9k
views
Comment: C: Galaxy .embl file conversion
5.0 years ago by Juke34 9.3k
0
votes
0
replies
3.5k
views
Answer: A: How can you measure the completeness of an annotation process?
5.0 years ago by Juke34 9.3k
2
votes
0
replies
1.9k
views
Answer: A: Galaxy .embl file conversion
5.0 years ago by Juke34 9.3k
0
votes
1
reply
1.7k
views
Comment: C: Strandness of ENCODE RNA-seq data
5.0 years ago by Juke34 9.3k
1
vote
1
reply
2.2k
views
Answer: A: Filter gmap GFF3 output by identity
5.0 years ago by Juke34 9.3k
1
vote
1
reply
2.7k
views
Comment: C: Strandness setting for HISAT2 : BGI sequencing platform
5.1 years ago by Juke34 9.3k
2
votes
0
replies
1.2k
views
Answer: A: combiner for gff3 files to predict gene model
5.1 years ago by Juke34 9.3k
0
votes
0
replies
1.7k
views
Answer: A: [Prokaryote] How to go from reads to counts given that there is no exon column i
5.1 years ago by Juke34 9.3k
0
votes
1
reply
10k
views
Comment: C: Converting GFF to GTF
5.1 years ago by Juke34 9.3k
1
vote
0
replies
2.4k
views
Answer: A: Count number of Genes in GFF3 file (Prokka output)
5.1 years ago by Juke34 9.3k
2
votes
1
reply
7.7k
views
Answer: A: Cutting fasta file into chunks?
5.1 years ago by Juke34 9.3k
1
vote
1
reply
9.1k
views
Comment: C: AGAT - Another Gff Analysis Toolkit
5.1 years ago by Juke34 9.3k
0
votes
0
replies
2.5k
views
Comment: C: SamReadViewer - A small utility to visualise read alignment directly from sam fo
5.1 years ago by Juke34 9.3k
0
votes
1
reply
2.5k
views
Comment: C: SamReadViewer - A small utility to visualise read alignment directly from sam fo
5.1 years ago by Juke34 9.3k
0
votes
0
replies
2.5k
views
Comment: C: SamReadViewer - A small utility to visualise read alignment directly from sam fo
5.1 years ago by Juke34 9.3k
1
vote
1
reply
2.5k
views
Comment: C: SamReadViewer - A small utility to visualise read alignment directly from sam fo
5.1 years ago by Juke34 9.3k
4
votes
0
replies
1.3k
views
Tool: Fix Prokka fragmented gene annotations - Long read assembly
fragmented-gene-annotation Prokka
updated 2.4 years ago by 45k • written 5.1 years ago by 9.3k
0
votes
0
replies
1.1k
views
Answer: A: GO and C++
5.1 years ago by Juke34 9.3k
7
votes
1
reply
5.8k
views
Answer: A: Please help : How to deal with 'Missing gene_name' of GTF file?
5.1 years ago by Juke34 9.3k
1
vote
0
replies
3.9k
views
Answer: A: Remove gene features from a given list
5.1 years ago by Juke34 9.3k
21
votes
26
replies
14k
views
11 follow
Tutorial: Create de novo repeat library
de-novo repeat annotation
updated 20 months ago by ▴ 30 • written 5.9 years ago by 9.3k
0
votes
0
replies
14k
views
Comment: C: Create de novo repeat library
5.1 years ago by Juke34 9.3k
1
vote
0
replies
1.2k
views
Answer: A: how about 3d-dna
5.2 years ago by Juke34 9.3k
1
vote
1
reply
2.0k
views
Answer: C: Processing GFF file for feature extraction
5.2 years ago by Juke34 9.3k
0
votes
0
replies
3.2k
views
Comment: C: How much the sorting order of a gff file matters?
5.2 years ago by Juke34 9.3k
12
votes
2
replies
3.6k
views
Forum: List of genome annotation tools (>140)
gene genome
updated 2.4 years ago by 45k • written 6.2 years ago by 9.3k
2
votes
0
replies
7.1k
views
Answer: A: Annotation pipelines in 2018
5.2 years ago by Juke34 9.3k
1
vote
1
reply
5.0k
views
Comment: C: Viral genome annotation
5.2 years ago by Juke34 9.3k
3
votes
0
replies
8.3k
views
Answer: A: Mitochondrial annotation tools other than MITOS and DOGMA
5.2 years ago by Juke34 9.3k
0
votes
1
reply
3.2k
views
Comment: C: How much the sorting order of a gff file matters?
5.2 years ago by Juke34 9.3k
0
votes
0
replies
3.2k
views
Comment: C: How much the sorting order of a gff file matters?
5.2 years ago by Juke34 9.3k
1
vote
1
reply
3.2k
views
Answer: A: How much the sorting order of a gff file matters?
5.2 years ago by Juke34 9.3k
0
votes
0
replies
3.5k
views
Comment: C: GFF3 to GTF problems
5.2 years ago by Juke34 9.3k
1
vote
1
reply
21k
views
Comment: C: Convert .gbff (gene bank flat format) to gff3, gtf
5.2 years ago by Juke34 9.3k
3
votes
1
reply
21k
views
Answer: A: Convert .gbff (gene bank flat format) to gff3, gtf
5.2 years ago by Juke34 9.3k
1
vote
0
replies
5.8k
views
Comment: C: Please help : How to deal with 'Missing gene_name' of GTF file?
5.2 years ago by Juke34 9.3k
2
votes
1
reply
2.4k
views
Comment: C: RNASeq, gtf file
5.2 years ago by Juke34 9.3k
1
vote
1
reply
2.4k
views
Answer: A: RNASeq, gtf file
5.2 years ago by Juke34 9.3k
0
votes
0
replies
2.4k
views
Comment: C: Why does Maker-P output Match-part?
5.2 years ago by Juke34 9.3k
0
votes
0
replies
2.4k
views
Answer: A: Why does Maker-P output Match-part?
5.2 years ago by Juke34 9.3k
3
votes
1
reply
1.7k
views
Answer: A: Splitting Multifasta file to individual files
5.2 years ago by Juke34 9.3k
3
votes
0
replies
2.1k
views
Answer: A: inclusion or exclusion in gff by list of chromosomes/scaffolds
5.3 years ago by Juke34 9.3k
0
votes
0
replies
2.1k
views
Comment: C: Maker Annotation Error
5.3 years ago by Juke34 9.3k
0
votes
1
reply
2.1k
views
Comment: C: Maker Annotation Error
5.3 years ago by Juke34 9.3k
1
vote
1
reply
2.3k
views
Comment: C: gffread: warnings when converting to GTF
5.3 years ago by Juke34 9.3k
1
vote
0
replies
29k
views
Comment: C: Is there a tool that sorts gtf files?
updated 5.3 years ago by 45k • written 5.3 years ago by 9.3k
3
votes
0
replies
4.4k
views
Tutorial: Sorting GFF/GTF files
gtf gff
updated 2.7 years ago by 45k • written 5.3 years ago by 9.3k
1
vote
1
reply
29k
views
Answer: A: Is there a tool that sorts gtf files?
5.3 years ago by Juke34 9.3k
0
votes
1
reply
2.0k
views
Comment: C: Standardizing 3rd party GFF3 file
5.3 years ago by Juke34 9.3k
1,001 results • Page 9 of 21
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6