User: insilico123

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insilico12310
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Posts by insilico123

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Comment: C: Cannot coerce class 'structure("IRanges", package = "IRanges")' into a data.fram
... use it to save the hits sink("ABC.txt") hits sink()   ...
written 4.9 years ago by insilico12310
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Comment: C: Cannot coerce class 'structure("IRanges", package = "IRanges")' into a data.fram
... then you can sink subject(hits) to a file ...
written 4.9 years ago by insilico12310
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Comment: C: Cannot coerce class 'structure("IRanges", package = "IRanges")' into a data.fram
... you can use sink It can output any variable into a file including XStringViews   ...
written 4.9 years ago by insilico12310
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Comment: C: Cannot coerce class 'structure("IRanges", package = "IRanges")' into a data.fram
... Give some code to show your data, or you can try use sink   sink("ABC.txt") hits sink()   ...
written 4.9 years ago by insilico12310
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Comment: C: Cannot coerce class 'structure("IRanges", package = "IRanges")' into a data.fram
... Ya individual objects can be saved, but it can be retrieved to the workspace by load() method. But here she wants to print the data to a file, not for loading the data to the workspace. ...
written 4.9 years ago by insilico12310
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Comment: C: Cannot coerce class 'structure("IRanges", package = "IRanges")' into a data.fram
... save() is meant for saving your current workspace which can be read back from the file at a      later date by using the function ‘load’. It is not for printing the output to a file ...
written 4.9 years ago by insilico12310
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Comment: C: Cannot coerce class 'structure("IRanges", package = "IRanges")' into a data.fram
... cat(data, file="Report.out") ...
written 4.9 years ago by insilico12310
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Comment: C: Feature extraction from protein sequences for machine learning classification
... From the literature I found following article: VaxiJen: a server for prediction of protective antigens, tumour antigens and subunit vaccines It uses Auto cross covariance (ACC). I have written  the following python code to calculate it. Please suggest if its working fine. http://biotoolsinsilico. ...
written 5.0 years ago by insilico12310
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Feature extraction from protein sequences for machine learning classification
... How to extract features from protein sequences, so that it can be converted into vector for training the data in machine learning. From some papers I found methods like using AAindex , PSSM  for training data. But I was unable to find the detailed method behind it. Please, suggest some papers or lin ...
python feature extraction machine learning written 5.0 years ago by insilico12310 • updated 17 months ago by allmotog0

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