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Comment:
Comment: How do I figure out pangenome location of hg38 coordinates?
5 weeks ago by
a5864557
▴ 10
3
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3
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How do I figure out pangenome location of hg38 coordinates?
pangenome
hg38
vg
updated 9 days ago by
lushjia
• 0 • written 5 weeks ago by
a5864557
▴ 10
0
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0
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254
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How to determine which pangenome nodes correspond to hg38 coordinates?
pangenome
reference-genome
hg38
genomics
3 months ago by
a5864557
▴ 10
0
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0
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442
views
Do different microarray chips yield different accuracy of polygenic scores?
microarray
genome
SNP
polygenic-risk-score
updated 18 months ago by
Ram
45k • written 18 months ago by
a5864557
▴ 10
0
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0
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884
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Comment:
Comment: What is a tool to get the genome build of a VCF?
18 months ago by
a5864557
▴ 10
0
votes
3
replies
884
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What is a tool to get the genome build of a VCF?
bcftools
vcf
updated 18 months ago by
Ram
45k • written 18 months ago by
a5864557
▴ 10
0
votes
0
replies
725
views
Comment:
Comment: Does Beagle use VCF information such as the "GQ" value, depth, or similar?
18 months ago by
a5864557
▴ 10
1
vote
2
replies
725
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Does Beagle use VCF information such as the "GQ" value, depth, or similar?
imputation
vcf
beagle
18 months ago by
a5864557
▴ 10
0
votes
0
replies
1.9k
views
Comment:
Comment: Running Beagle on a VCF with 1 sample
18 months ago by
a5864557
▴ 10
0
votes
1
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1.5k
views
Comment:
Comment: Is a human genome file with reference as NCBI37 the same as hg19?
23 months ago by
a5864557
▴ 10
1
vote
5
replies
1.5k
views
Is a human genome file with reference as NCBI37 the same as hg19?
vcf
hg19
genome
reference-genome
updated 23 months ago by
GenoMax
150k • written 23 months ago by
a5864557
▴ 10
0
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1
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1.5k
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Comment:
Comment: Is a human genome file with reference as NCBI37 the same as hg19?
23 months ago by
a5864557
▴ 10
1
vote
2
replies
1.0k
views
Where do I get a large reference VCF?
1000genomes
vcf
genome
reference-genome
ukbiobank
updated 24 months ago by
chrchang523
11k • written 24 months ago by
a5864557
▴ 10
0
votes
0
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1.0k
views
Comment:
Comment: Where do I get a large reference VCF?
24 months ago by
a5864557
▴ 10
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