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Answer: Answer: How do I install MAQ software on Ubuntu?
2.0 years ago by Charles Plessy ★ 2.9k
3
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2
replies
888
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Answer: Answer: Cat many paired fasta files in directory in terminal
2.1 years ago by Charles Plessy ★ 2.9k
2
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1
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938
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Answer: Answer: Question regarding CAGE and UCSC promoters and enhancers
2.4 years ago by Charles Plessy ★ 2.9k
0
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0
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878
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Answer: Answer: Is there any tool to combine CAGE-seq data, Iso-seq data and RNAseq data?
2.5 years ago by Charles Plessy ★ 2.9k
2
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1
reply
11k
views
Answer: A: problem with installation of package ggplot2
updated 3.7 years ago by 43k • written 8.6 years ago by ★ 2.9k
1
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0
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11k
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Answer: A: demultiplex a dataset when you have barcodes as a separate fastq
updated 3.7 years ago by 43k • written 6.7 years ago by ★ 2.9k
0
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0
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2.4k
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Answer: A: Imput files from Refseq database in the program seqret [Emboss]
updated 4.5 years ago by 43k • written 9.6 years ago by ★ 2.9k
0
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1
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4.1k
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Answer: A: BLAST 2.3.0 Linux
updated 5.6 years ago by 43k • written 8.2 years ago by ★ 2.9k
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0
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1.8k
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Answer: A: Change fasta file header to include number of times a read apears
updated 5.6 years ago by 43k • written 8.2 years ago by ★ 2.9k
1
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0
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2.4k
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Answer: A: awk? how to retrieve info from massive Primer3 output file
updated 5.6 years ago by 43k • written 8.2 years ago by ★ 2.9k
0
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0
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2.5k
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Answer: A: Remove rows based on duplicates in one column
updated 5.6 years ago by 43k • written 8.2 years ago by ★ 2.9k
0
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0
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2.9k
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Answer: A: T Cell Receptor Sequencing total reads/clone count vs unique clones
updated 5.6 years ago by 43k • written 8.2 years ago by ★ 2.9k
1
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0
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1.9k
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Answer: A: Bowtie alignment of piRNAs to find potential targets
5.8 years ago by Charles Plessy ★ 2.9k
1
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0
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1.9k
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Answer: A: Bowtie alignment of piRNAs to find potential targets
5.8 years ago by Charles Plessy ★ 2.9k
2
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0
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2.7k
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Answer: A: Building bioinformatics tools in Ubuntu 17.10
6.0 years ago by Charles Plessy ★ 2.9k
0
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1
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1.9k
views
Answer: A: suggestions to compare gene counts
6.2 years ago by Charles Plessy ★ 2.9k
0
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0
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3.8k
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Answer: A: install genewise (wise2.4.1) on linux
6.2 years ago by Charles Plessy ★ 2.9k
5
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0
replies
12k
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Answer: A: HOw to merge multifasta sequence into a single sequence having only one header?
6.2 years ago by Charles Plessy ★ 2.9k
1
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1
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3.1k
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Answer: A: Demultiplex pair-end fastq reads with barcode 2 in the identifier line
6.3 years ago by Charles Plessy ★ 2.9k
0
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1
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1.5k
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Answer: A: extracting a column by grepping particular rows
6.3 years ago by Charles Plessy ★ 2.9k
1
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0
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3.1k
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Answer: A: package 'karyoploteR' is not available (for R version 3.3.3)
6.3 years ago by Charles Plessy ★ 2.9k
0
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0
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3.6k
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Answer: A: Where to download older version of R packages in Bioconductor?
6.3 years ago by Charles Plessy ★ 2.9k
0
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0
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1.3k
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Answer: A: Visualizing Replicates Genome Browser
6.3 years ago by Charles Plessy ★ 2.9k
1
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0
replies
3.6k
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Answer: A: Can anyone suggest a RShiny app for displaying RNA-seq results online
6.3 years ago by Charles Plessy ★ 2.9k
1
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0
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5.1k
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Answer: A: awk one line command
6.3 years ago by Charles Plessy ★ 2.9k
3
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2
replies
5.6k
views
Answer: A: Recommendations of Linux distros for beginners in bioinformatics
6.4 years ago by Charles Plessy ★ 2.9k
1
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0
replies
16k
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Answer: A: What exactly is sequencing depth in RNAseq?
6.4 years ago by Charles Plessy ★ 2.9k
1
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1
reply
4.9k
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Answer: A: Minimal TPM threshold for qPCR measure of gene expression
6.4 years ago by Charles Plessy ★ 2.9k
3
votes
1
reply
1.9k
views
Answer: A: The push toward standardisation
6.4 years ago by Charles Plessy ★ 2.9k
0
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0
replies
1.3k
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Answer: A: Help with Illumnina Headers
6.4 years ago by Charles Plessy ★ 2.9k
5
votes
1
reply
2.9k
views
Answer: A: ERCC count matrix smart-seq2
6.5 years ago by Charles Plessy ★ 2.9k
1
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0
replies
1.6k
views
Answer: A: Change list of consecutive genomic coordinates to intervals?
6.5 years ago by Charles Plessy ★ 2.9k
0
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1
reply
8.7k
views
Answer: A: Stranger Things: unexpected limitations of popular tools
6.5 years ago by Charles Plessy ★ 2.9k
0
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0
replies
10k
views
Answer: A: rRNA detection (for contamination) in RNA-seq
6.5 years ago by Charles Plessy ★ 2.9k
2
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1
reply
4.3k
views
Answer: A: Genome Browser suggestions
6.6 years ago by Charles Plessy ★ 2.9k
0
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0
replies
11k
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Answer: A: How to save GRanges object to csv file
6.6 years ago by Charles Plessy ★ 2.9k
0
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0
replies
4.8k
views
Answer: A: Find gene using nucleotide sequence position in R
6.7 years ago by Charles Plessy ★ 2.9k
0
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0
replies
2.4k
views
Answer: A: Visualising indexed and sorted bam files
6.7 years ago by Charles Plessy ★ 2.9k
0
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0
replies
3.6k
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Answer: A: counting ERCCs spike-ins in RNAseq data
6.7 years ago by Charles Plessy ★ 2.9k
0
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0
replies
2.2k
views
Answer: A: NCBI: dowload all genomes obtained from soil/marine/host associated bacteria/org
6.7 years ago by Charles Plessy ★ 2.9k
2
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0
replies
2.5k
views
Answer: A: Using needle command with no output to the terminal
6.7 years ago by Charles Plessy ★ 2.9k
1
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0
replies
2.1k
views
Answer: A: How to add last 20 nt to the beginning of reads?
6.7 years ago by Charles Plessy ★ 2.9k
1
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0
replies
5.8k
views
Answer: A: Remove the last few bases from fasta sequences
6.8 years ago by Charles Plessy ★ 2.9k
1
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1
reply
3.8k
views
Answer: A: Running Primer3 to give Tm values only
6.8 years ago by Charles Plessy ★ 2.9k
0
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1
reply
1.4k
views
Answer: A: Define exact peak borders
6.8 years ago by Charles Plessy ★ 2.9k
3
votes
0
replies
1.3k
views
Answer: A: mouse Cx30 promoter
6.8 years ago by Charles Plessy ★ 2.9k
2
votes
1
reply
17k
views
Answer: A: Run Samtools on multiple files
6.8 years ago by Charles Plessy ★ 2.9k
6
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2
replies
2.1k
views
Answer: A: "TRUE" instead of "T" allele in R
6.8 years ago by Charles Plessy ★ 2.9k
2
votes
1
reply
4.1k
views
Answer: A: fastq_quality_trimmer: Premature End-Of-File
6.8 years ago by Charles Plessy ★ 2.9k
1
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0
replies
1.9k
views
Answer: A: trying to identify all tss' for a mouse genomewide
6.8 years ago by Charles Plessy ★ 2.9k
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