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1.5k
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Comment:
C: Seurat on both pooled and unpooled samples
4.2 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
2.2k
views
Comment:
C: Nothing will align with HTSeq?
updated 4.4 years ago by
Ram
43k • written 8.5 years ago by
Kristin Muench
▴ 620
0
votes
0
replies
2.2k
views
Comment:
C: Nothing will align with HTSeq?
updated 4.4 years ago by
Ram
43k • written 8.5 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
2.2k
views
Comment:
C: Nothing will align with HTSeq?
updated 4.4 years ago by
Ram
43k • written 8.5 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
2.2k
views
Comment:
C: Nothing will align with HTSeq?
updated 4.4 years ago by
Ram
43k • written 8.5 years ago by
Kristin Muench
▴ 620
0
votes
0
replies
3.3k
views
Comment:
C: SVA Input: Should SVs be calculated on normalized data?
4.6 years ago by
Kristin Muench
▴ 620
0
votes
0
replies
1.9k
views
Comment:
C: miRNAs detected in bulk mRNA-Seq data - how to annotate?
4.8 years ago by
Kristin Muench
▴ 620
0
votes
0
replies
1.9k
views
Comment:
C: miRNAs detected in bulk mRNA-Seq data - how to annotate?
4.8 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
1.9k
views
Comment:
C: miRNAs detected in bulk mRNA-Seq data - how to annotate?
4.8 years ago by
Kristin Muench
▴ 620
0
votes
0
replies
3.4k
views
Comment:
C: GATK failing to find any variants - how to troubleshoot?
5.0 years ago by
Kristin Muench
▴ 620
0
votes
0
replies
3.4k
views
Comment:
C: GATK failing to find any variants - how to troubleshoot?
5.0 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
3.4k
views
Comment:
C: GATK failing to find any variants - how to troubleshoot?
5.0 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
3.4k
views
Comment:
C: GATK failing to find any variants - how to troubleshoot?
5.0 years ago by
Kristin Muench
▴ 620
0
votes
2
replies
3.4k
views
Comment:
C: GATK failing to find any variants - how to troubleshoot?
5.0 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
3.4k
views
Comment:
C: GATK failing to find any variants - how to troubleshoot?
5.0 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
3.4k
views
Comment:
C: GATK failing to find any variants - how to troubleshoot?
5.0 years ago by
Kristin Muench
▴ 620
1
vote
0
replies
3.4k
views
Comment:
C: GATK failing to find any variants - how to troubleshoot?
5.0 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
3.4k
views
Comment:
C: GATK failing to find any variants - how to troubleshoot?
5.0 years ago by
Kristin Muench
▴ 620
1
vote
1
reply
3.1k
views
Comment:
C: Normal to have high variability in Broad Institute's GSEA Output?
5.1 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
1.5k
views
Comment:
C: Seurat on both pooled and unpooled samples
5.2 years ago by
Kristin Muench
▴ 620
1
vote
0
replies
6.5k
views
Comment:
C: Handling biological replicates across batches in DESeq2
5.4 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
6.5k
views
Comment:
C: Handling biological replicates across batches in DESeq2
5.4 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
6.5k
views
Comment:
C: Handling biological replicates across batches in DESeq2
5.4 years ago by
Kristin Muench
▴ 620
0
votes
2
replies
6.5k
views
Comment:
C: Handling biological replicates across batches in DESeq2
5.4 years ago by
Kristin Muench
▴ 620
0
votes
0
replies
6.5k
views
Comment:
C: Handling biological replicates across batches in DESeq2
5.4 years ago by
Kristin Muench
▴ 620
0
votes
0
replies
8.1k
views
Comment:
C: "Duplicate rownames not allowed" when the rownames are not duplicated
5.5 years ago by
Kristin Muench
▴ 620
0
votes
0
replies
1.4k
views
Comment:
C: [DESeq] Collapsing replicate across sequencing batches?
updated 5.5 years ago by
h.mon
35k • written 5.5 years ago by
Kristin Muench
▴ 620
1
vote
1
reply
3.1k
views
Comment:
C: Normal to have high variability in Broad Institute's GSEA Output?
5.5 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
3.1k
views
Comment:
C: Normal to have high variability in Broad Institute's GSEA Output?
5.5 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
3.1k
views
Comment:
C: Normal to have high variability in Broad Institute's GSEA Output?
5.5 years ago by
Kristin Muench
▴ 620
0
votes
0
replies
3.9k
views
Comment:
C: Visualizing alignment of kallisto .bam files to hg19 (and custom plasmids)
5.5 years ago by
Kristin Muench
▴ 620
0
votes
0
replies
3.9k
views
Comment:
C: Visualizing alignment of kallisto .bam files to hg19 (and custom plasmids)
5.6 years ago by
Kristin Muench
▴ 620
0
votes
0
replies
3.9k
views
Comment:
C: Visualizing alignment of kallisto .bam files to hg19 (and custom plasmids)
5.6 years ago by
Kristin Muench
▴ 620
0
votes
0
replies
3.9k
views
Comment:
C: Visualizing alignment of kallisto .bam files to hg19 (and custom plasmids)
5.6 years ago by
Kristin Muench
▴ 620
0
votes
0
replies
3.9k
views
Comment:
C: Visualizing alignment of kallisto .bam files to hg19 (and custom plasmids)
5.6 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
15k
views
Comment:
A: How to download human reference transcriptome (hg19)
5.6 years ago by
Kristin Muench
▴ 620
0
votes
0
replies
5.7k
views
Comment:
C: Design in DESeq: Can you combine explicit and implicit batch effect correction i
5.6 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
5.7k
views
Comment:
C: Design in DESeq: Can you combine explicit and implicit batch effect correction i
5.6 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
5.7k
views
Comment:
C: Design in DESeq: Can you combine explicit and implicit batch effect correction i
5.6 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
7.9k
views
Comment:
C: How many reads should I expect for paired end reads when coverage = 30 million?
5.6 years ago by
Kristin Muench
▴ 620
1
vote
0
replies
7.9k
views
Comment:
C: How many reads should I expect for paired end reads when coverage = 30 million?
5.6 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
5.7k
views
Comment:
C: Design in DESeq: Can you combine explicit and implicit batch effect correction i
5.6 years ago by
Kristin Muench
▴ 620
0
votes
0
replies
5.7k
views
Comment:
C: Design in DESeq: Can you combine explicit and implicit batch effect correction i
5.6 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
4.5k
views
Comment:
C: kallisto pseudoaligned bam files to IGV
5.6 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
12k
views
Comment:
C: Making a heatmap: sample vs. fold change
5.6 years ago by
Kristin Muench
▴ 620
0
votes
0
replies
1.9k
views
Comment:
C: Help understanding the meaning of variables in DESeq design matrix
5.6 years ago by
Kristin Muench
▴ 620
0
votes
0
replies
6.7k
views
Comment:
C: Multi-factor analysis with DESeq: which approach is correct?
5.6 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
6.7k
views
Comment:
C: Multi-factor analysis with DESeq: which approach is correct?
5.6 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
6.7k
views
Comment:
C: Multi-factor analysis with DESeq: which approach is correct?
5.6 years ago by
Kristin Muench
▴ 620
0
votes
1
reply
4.4k
views
Comment:
C: Kallisto will not produce .bam files
5.9 years ago by
Kristin Muench
▴ 620
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