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1
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180
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How to use LOEUF plugin in VEP?
LOEUF
VEP
updated 12 hours ago by
GenoMax
150k • written 1 day ago by
Sd
• 0
0
votes
0
replies
180
views
Comment:
Comment: How to use LOEUF plugin in VEP?
13 hours ago by
Sd
• 0
1
vote
1
reply
493
views
Different Size VCF
GATK
VCF
compression
updated 9 months ago by
Pierre Lindenbaum
166k • written 9 months ago by
Sd
• 0
0
votes
0
replies
2.1k
views
Comment:
Comment: GenotypeGVCF too many genotypes from pooled samples
10 months ago by
Sd
• 0
0
votes
0
replies
7.6k
views
Comment:
Comment: GATK genomicsDBimport intervals for WGS
11 months ago by
Sd
• 0
0
votes
0
replies
1.1k
views
Comment:
Comment: How to slice a gvcf file with tabix?
11 months ago by
Sd
• 0
0
votes
1
reply
1.1k
views
Comment:
Comment: How to slice a gvcf file with tabix?
12 months ago by
Sd
• 0
0
votes
1
reply
1.1k
views
Comment:
Comment: How to slice a gvcf file with tabix?
12 months ago by
Sd
• 0
0
votes
6
replies
1.1k
views
How to slice a gvcf file with tabix?
Tabix
bed
gvcf
11 months ago by
Sd
• 0
1
vote
2
replies
1.1k
views
CombineGVCFs vs. MergeVcfs
CombineGVCFs
MergeVcfs
GATK
WGS
GVCF
updated 12 months ago by
Jeremy Leipzig
23k • written 12 months ago by
Sd
• 0
0
votes
1
reply
600
views
How to calculate depth of coverage and applying read depth filter
Depth-of-Coverage
CRAM
WGS
updated 12 months ago by
Ram
45k • written 12 months ago by
Sd
• 0
0
votes
0
replies
1.1k
views
Comment:
Comment: CollectVariantCallingMetrics Error
13 months ago by
Sd
• 0
0
votes
1
reply
1.1k
views
Comment:
Comment: CollectVariantCallingMetrics Error
13 months ago by
Sd
• 0
0
votes
5
replies
1.1k
views
CollectVariantCallingMetrics Error
CollectVariantCallingMetrics
GATK
GVCF
13 months ago by
Sd
• 0
0
votes
0
replies
2.4k
views
Comment:
Comment: Individual vs. joint call VCFs
16 months ago by
Sd
• 0
0
votes
1
reply
2.4k
views
Comment:
Comment: Individual vs. joint call VCFs
16 months ago by
Sd
• 0
5
votes
7
replies
2.4k
views
Individual vs. joint call VCFs
GATK
VCF
WGS
updated 16 months ago by
Brian Bushnell
20k • written 16 months ago by
Sd
• 0
2
votes
14
replies
2.4k
views
How to slice a CRAM file into the 50kb regions padded with 1kb?
GATK
BED
CRAM
WGS
updated 17 months ago by
ATpoint
87k • written 17 months ago by
Sd
• 0
0
votes
1
reply
2.4k
views
Answer:
Answer: How to slice a CRAM file into the 50kb regions padded with 1kb?
17 months ago by
Sd
• 0
0
votes
1
reply
2.4k
views
Comment:
Comment: How to slice a CRAM file into the 50kb regions padded with 1kb?
17 months ago by
Sd
• 0
0
votes
1
reply
2.4k
views
Comment:
Comment: How to slice a CRAM file into the 50kb regions padded with 1kb?
17 months ago by
Sd
• 0
0
votes
1
reply
2.4k
views
Comment:
Comment: How to slice a CRAM file into the 50kb regions padded with 1kb?
17 months ago by
Sd
• 0
0
votes
2
replies
2.4k
views
Comment:
Comment: How to slice a CRAM file into the 50kb regions padded with 1kb?
17 months ago by
Sd
• 0
0
votes
1
reply
539
views
Does GATK SetNmMdAndUqTags reduces the size of a CRAM?
CRAM
WGS
sam
GATK
SetNmMdAndUqTags
updated 18 months ago by
Pierre Lindenbaum
166k • written 18 months ago by
Sd
• 0
3
votes
1
reply
639
views
How to BLAST a FASTA sequence with unknown organism source
chrZ
BLAST
FASTA
updated 18 months ago by
Joe
22k • written 18 months ago by
Sd
• 0
2
votes
3
replies
1.1k
views
Hwo to identify that BQSR is performed on CRAM file
Illumina
GATK
WGS
sequencing
BQSR
updated 21 months ago by
raphael.B
▴ 530 • written 21 months ago by
Sd
• 0
0
votes
1
reply
1.1k
views
Comment:
Comment: Hwo to identify that BQSR is performed on CRAM file
21 months ago by
Sd
• 0
5
votes
4
replies
1.1k
views
How to Split 3000 WGS CRAM files into 1Mbp length chunks
CRAM
updated 23 months ago by
cmdcolin
★ 4.2k • written 23 months ago by
Sd
• 0
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