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Answer: A: what are the best resource to learn Linux bash scripting for Bioinformatics
updated 4.3 years ago by 43k • written 9.9 years ago by ★ 2.4k
2
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1
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6.5k
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Answer: A: IGV for RNA-SEQ
updated 4.3 years ago by 43k • written 9.9 years ago by ★ 2.4k
3
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1
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6.3k
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Answer: A: Normalizing For Batch Effect In RNA-Seq Data
updated 4.3 years ago by 43k • written 10.0 years ago by ★ 2.4k
3
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0
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41k
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Answer: A: Will Python Take The Place Of R?
updated 4.3 years ago by 43k • written 10.0 years ago by ★ 2.4k
2
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1
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18k
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Answer: A: Is There Any Other Method For Isoform-Level Differential Expression Analysis Exc
updated 4.3 years ago by 43k • written 10.0 years ago by ★ 2.4k
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1
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2.7k
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Answer: A: why tophat finds overlong introns?
updated 4.3 years ago by 43k • written 10.0 years ago by ★ 2.4k
2
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1
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2.5k
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Answer: A: Upgrade to IGB 8.5.0 has lost my bookmarks and Quickload servers
updated 4.4 years ago by 43k • written 8.4 years ago by ★ 2.4k
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1
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2.4k
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Answer: A: Inconsistent display of GFF files in IGB
updated 4.4 years ago by 43k • written 8.5 years ago by ★ 2.4k
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1
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6.4k
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Answer: A: need to separate read1 and read2 to run tophat2
updated 4.5 years ago by 43k • written 9.3 years ago by ★ 2.4k
5
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0
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9.5k
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Answer: A: how to use a bed file with htseq-count
updated 4.5 years ago by 43k • written 9.9 years ago by ★ 2.4k
1
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1
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2.7k
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Answer: A: PileOMeth double counting when paired-end reads overlap?
7.5 years ago by Ann ★ 2.4k
6
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1
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4.2k
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Answer: A: Big Browser : a new genom browser in development
8.1 years ago by Ann ★ 2.4k
1
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1
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5.1k
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Answer: Answer: Viewing the tophat output (mapped.bam and junctions) along with genome coordinat
updated 16 months ago by 43k • written 8.8 years ago by ★ 2.4k
7
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0
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5.1k
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Answer: Answer: Viewing the tophat output (mapped.bam and junctions) along with genome coordinat
updated 16 months ago by 43k • written 8.8 years ago by ★ 2.4k
2
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0
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3.1k
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Answer: A: Can IGB load BED 6+3 files?
9.0 years ago by Ann ★ 2.4k
0
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1
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2.6k
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Answer: Answer: is there a way to get splice sites from BLAST results?
updated 23 months ago by 43k • written 9.1 years ago by ★ 2.4k
2
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1
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4.3k
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Answer: Answer: Which genome browser to display bacterial draft genomes?
updated 23 months ago by 43k • written 9.1 years ago by ★ 2.4k
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1
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3.0k
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Answer: Answer: Computational requirement to host a genome browser
updated 2.1 years ago by 43k • written 9.3 years ago by ★ 2.4k
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0
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4.1k
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Answer: A: How to create your genome in IGV?
9.4 years ago by Ann ★ 2.4k
4
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2
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2.7k
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Answer: Answer: Integrate a Genome Browser into a Java application
updated 2.1 years ago by 43k • written 9.4 years ago by ★ 2.4k
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0
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6.7k
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Answer: Answer: Should I log-transform microarray gene expression data before applying PCA?
updated 2.2 years ago by 43k • written 9.4 years ago by ★ 2.4k
2
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0
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3.8k
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Answer: Answer: IGB- genome sequence in sequence viewer just shows dashes
updated 2.2 years ago by 43k • written 9.4 years ago by ★ 2.4k
4
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0
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4.9k
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Answer: Answer: viewing BED Graph files on the IGB
updated 2.2 years ago by 43k • written 9.4 years ago by ★ 2.4k
2
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0
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6.0k
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Answer: A: what are the control samples when using MACS to find ChiP-seq peaks?
9.4 years ago by Ann ★ 2.4k
8
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0
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25k
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Answer: Answer: Genomics is not Special. Computational Biologists are reinventing the wheel for
updated 2.2 years ago by 43k • written 9.4 years ago by ★ 2.4k
3
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0
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2.4k
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Answer: Answer: visualize tiling array file to IGB
updated 2.2 years ago by 43k • written 9.5 years ago by ★ 2.4k
0
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1
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5.5k
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Answer: Answer: RNA probe ids from affymetrix
updated 2.2 years ago by 43k • written 9.5 years ago by ★ 2.4k
1
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0
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3.0k
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Answer: Answer: Microarray data analysis for detecting alternative splicing
updated 3.1 years ago by 43k • written 9.5 years ago by ★ 2.4k
1
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1
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3.0k
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Answer: Answer: Microarray data analysis for detecting alternative splicing
updated 3.1 years ago by 43k • written 9.5 years ago by ★ 2.4k
1
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2
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4.9k
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Answer: Answer: An idea to identify batch effects
updated 2.3 years ago by 43k • written 9.6 years ago by ★ 2.4k
4
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1
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7.2k
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Answer: A: Pathway Analysis Tool
9.7 years ago by Ann ★ 2.4k
3
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3
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41k
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Answer: Answer: How Do You Justify Your Rna-Seq Expression Threshold (Fpkm/Rpkm) ?
updated 2.4 years ago by 43k • written 9.8 years ago by ★ 2.4k
0
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0
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5.5k
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Answer: A: Biostar on Google Summer of Code. Suggest features that you would like to see!
9.8 years ago by Ann ★ 2.4k
1
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0
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2.6k
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Answer: Answer: Why number of reads in a sample that are assigned to gene i can be modeled by a
updated 2.5 years ago by 43k • written 9.8 years ago by ★ 2.4k
16
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4
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40k
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Answer: Answer: Why Does Rna-Seq Read Count Fit Poisson Distribution?
updated 2.5 years ago by 43k • written 9.8 years ago by ★ 2.4k
0
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0
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3.0k
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Answer: A: Get all RefSeq transcripts from hg18
9.8 years ago by Ann ★ 2.4k
3
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0
replies
11k
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Answer: Answer: which one is better EdgeR or DEGSeq?
updated 2.5 years ago by 43k • written 9.8 years ago by ★ 2.4k
1
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1
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4.8k
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Answer: A: Splice Junction file intersection with genome annotation
9.9 years ago by Ann ★ 2.4k
0
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0
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4.2k
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Answer: A: Front End, Workflow, Or Web Interface For Bioconductor
9.9 years ago by Ann ★ 2.4k
3
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1
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14k
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Answer: A: Visualize Strand-Specific Rna-Seq : How To Differentiate Strands
10.0 years ago by Ann ★ 2.4k
6
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0
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8.9k
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Answer: A: Download Geo Sra Data Using Aspera Connect
10.0 years ago by Ann ★ 2.4k
1
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0
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5.2k
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Answer: A: If you have a chance to ask questions to the CEO of Illumina, what would you do?
10.0 years ago by Ann ★ 2.4k
1
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1
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6.0k
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Answer: A: Plant Annotation Workflow
10.1 years ago by Ann ★ 2.4k
1
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0
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3.1k
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Answer: A: Is Igv Software The Only Available Software To Open Bam File
10.5 years ago by Ann ★ 2.4k
2
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1
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2.5k
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Answer: A: Best Practices For Naming De Novo Transcriptome Sequences?
10.5 years ago by Ann ★ 2.4k
1
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0
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4.9k
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Answer: A: Is There An Alternative For Igb Which Can Display Normalized Rna-Seq Coverages?
12.9 years ago by Ann ★ 2.4k
3
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1
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16k
views
Answer: A: Next Generation Read Sequence Assembly Visualization Software
13.2 years ago by Ann ★ 2.4k
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