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Comment: Comment: scRNASeq equal number of cells across conditions
3.0 years ago by TriS ★ 4.7k
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2
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scRNASeq equal number of cells across conditions
scRNAseq seurat
updated 3.0 years ago by 81k • written 3.0 years ago by ★ 4.7k
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176
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95k
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Tutorial: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
RNA-Seq Survival TCGA
updated 11 months ago by 43k • written 8.7 years ago by ★ 4.7k
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8
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visualize overlapping nodes in Cytoscape
cytoscape networks graph
updated 22 months ago by 43k • written 9.1 years ago by ★ 4.7k
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Answer: A: Seurat "FindMarkers" and "FindallMarkers" v.s. Scanpy "rank_genes_groups"
3.7 years ago by TriS ★ 4.7k
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Comment: C: logistic regression subset data
updated 4.3 years ago by 43k • written 8.2 years ago by ★ 4.7k
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Answer: A: identity the correlation between gene expression and estrogene
updated 4.3 years ago by 43k • written 8.2 years ago by ★ 4.7k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
updated 4.3 years ago by 43k • written 8.2 years ago by ★ 4.7k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
updated 4.3 years ago by 43k • written 8.2 years ago by ★ 4.7k
3
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1
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3.6k
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Comment: C: Everything significant in Limma for Differential Expression
updated 4.3 years ago by 43k • written 8.2 years ago by ★ 4.7k
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95k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
updated 4.3 years ago by 43k • written 8.2 years ago by ★ 4.7k
0
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Answer: A: About Dream Challenge Somatic Mutation Calling Algorithms
updated 4.3 years ago by 43k • written 8.3 years ago by ★ 4.7k
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Answer: A: RNA-seq study Looking for for Publicly Available Cancer and Virus FTP Databases
updated 4.3 years ago by 43k • written 8.3 years ago by ★ 4.7k
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Comment: C: Volcano plot for multiple clusters
4.4 years ago by TriS ★ 4.7k
2
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2
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4.9k
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Answer: Answer: Creating a Venn Diagram from Microarray Data
updated 20 months ago by 43k • written 8.4 years ago by ★ 4.7k
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Comment: C: Generating Gencode TSS file
updated 4.4 years ago by 43k • written 8.4 years ago by ★ 4.7k
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Comment: C: pros- and cons- : programming skills vs. GUI
updated 4.4 years ago by 43k • written 8.4 years ago by ★ 4.7k
2
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1
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1.6k
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Answer: A: mRNA expression levels association
updated 4.4 years ago by 43k • written 8.4 years ago by ★ 4.7k
2
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1
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2.5k
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Answer: A: Bioinformatics course good for microbiology student or not?
updated 4.4 years ago by 43k • written 8.4 years ago by ★ 4.7k
2
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1
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4.4k
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Answer: A: Volcano plot for multiple clusters
4.4 years ago by TriS ★ 4.7k
0
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0
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95k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
4.4 years ago by TriS ★ 4.7k
1
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2
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2.4k
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Answer: A: How to compare these distributions?
updated 4.4 years ago by 43k • written 8.4 years ago by ★ 4.7k
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2.4k
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Comment: C: How to compare these distributions?
updated 4.4 years ago by 43k • written 8.4 years ago by ★ 4.7k
2
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1
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2.6k
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Answer: A: Searching Project in bioinformatics
updated 4.4 years ago by 43k • written 8.4 years ago by ★ 4.7k
3
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2
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9.6k
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Answer: Answer: Do bioinformaticians often break molecular biologists' hearts by being the first
updated 12 months ago by 43k • written 8.4 years ago by ★ 4.7k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
updated 4.4 years ago by 43k • written 8.3 years ago by ★ 4.7k
0
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2
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95k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
updated 4.4 years ago by 43k • written 8.5 years ago by ★ 4.7k
0
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0
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Comment: C: Statistical test to compare two discrete distributions
updated 4.4 years ago by 43k • written 8.5 years ago by ★ 4.7k
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1
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2.9k
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Comment: C: breakdancer - cfg creation and chi square problem
updated 4.4 years ago by 43k • written 8.5 years ago by ★ 4.7k
3
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0
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95k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
updated 4.4 years ago by 43k • written 8.5 years ago by ★ 4.7k
0
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0
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4.9k
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Comment: C: How to find duplicate values in two columns and move them to a third?
updated 4.4 years ago by 43k • written 8.5 years ago by ★ 4.7k
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2
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Answer: A: blasting a nucleotide query file (about 2000 seq) over a group of transcriptomes
updated 4.4 years ago by 43k • written 8.5 years ago by ★ 4.7k
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0
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Comment: C: indel position in repetitive regions
updated 4.4 years ago by 43k • written 8.5 years ago by ★ 4.7k
0
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1
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2.1k
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Comment: C: Function in R/File: the most expressed genes.
updated 4.5 years ago by 43k • written 8.7 years ago by ★ 4.7k
0
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95k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
updated 4.5 years ago by 43k • written 8.7 years ago by ★ 4.7k
0
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1
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6.5k
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Answer: A: Using bowtie2 in parallel
updated 4.5 years ago by 43k • written 9.2 years ago by ★ 4.7k
1
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1
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4.2k
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Answer: C: Getting Started with Deconseq
updated 4.5 years ago by 43k • written 9.3 years ago by ★ 4.7k
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Answer: A: Can I identify a cell type by comparison with published transcriptomes of known
updated 4.7 years ago by 81k • written 8.0 years ago by ★ 4.7k
16
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11
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14k
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7 follow
Tutorial: retrieve full TCGA datasets from cBioportal with R
TCGA RNA-seq data-retrieval cBioportal R
updated 13 months ago by 43k • written 7.5 years ago by ★ 4.7k
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Answer: A: Oncotator Data Source
updated 5.0 years ago by 43k • written 8.4 years ago by ★ 4.7k
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0
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95k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
5.0 years ago by TriS ★ 4.7k
0
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0
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95k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
5.0 years ago by TriS ★ 4.7k
0
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0
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95k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
5.0 years ago by TriS ★ 4.7k
0
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0
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95k
views
Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
5.0 years ago by TriS ★ 4.7k
0
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1
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95k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
5.0 years ago by TriS ★ 4.7k
2
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3
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2.3k
views
MACS usage for IgG and treatment
MACS ChIP-Seq normalization
updated 2.1 years ago by 43k • written 9.4 years ago by ★ 4.7k
0
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9
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3.5k
views
Sam file header and truncated file
sam samtools header
updated 5.9 years ago by • 0 • written 7.5 years ago by ★ 4.7k
2
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0
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95k
views
Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
6.2 years ago by TriS ★ 4.7k
0
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1
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95k
views
Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
6.2 years ago by TriS ★ 4.7k
1
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0
replies
2.4k
views
Comment: C: How to visualize Proteome Networks
6.4 years ago by TriS ★ 4.7k
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