User: zhhxu9

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zhhxu910
Reputation:
10
Status:
New User
Location:
Canada
Last seen:
3 weeks ago
Joined:
5 years, 11 months ago
Email:
z*****@gmail.com

Posts by zhhxu9

<prev • 5 results • page 1 of 1 • next >
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Answer: A: Subset Function in Ballgown
... You need to do this for subsetting different group of samples: bg_ifungis_Earth = subset(bg_ifungis_filt, "location == 'Earth'",genomesubset=FALSE) Note that: The bg object is the one you want to subset from. The condition expression is in double quote. The feature name `location` from t ...
written 5 weeks ago by zhhxu910
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Comment: C: One question about using bowtie2 in genome mapping
... Hi, I got further questions. As I mentioned before. My R1 file contains more reads than R2. So when I run bowtie2 in pair-end way, at the beginning, the program run properly and I can see the output SAM file size increasing, which means the results are written in the SAM file. However nothing was wr ...
written 5.9 years ago by zhhxu910
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Comment: C: One question about using bowtie2 in genome mapping
... Thanks for your answers, which are very helpful. You solved most of my questions. I will check the data and to see if there are more problems come out. ...
written 5.9 years ago by zhhxu910
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One question about using bowtie2 in genome mapping
... Hi everyone, I have a question about bowtie2 in mapping. I have my paired-end sequencing data, but due to some reason, I got a relatively low read number for the R1 data. But the R2 data have much more reads than R1 data. In that case, if I mapping genome in pair-end way, I think the total reads w ...
bowtie2 mapping written 5.9 years ago by zhhxu910 • updated 5.9 years ago by Ashutosh Pandey12k
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Error with bowtie2
... Hi, I encounter a error when I am running the bowtie2 for genome mapping. I use the latest version, which is bowtie2. 2.3 After installing bowtie2, I build the index for it, which run successfully and the index files are generated. Then I began to mapping using the following command: bowtie2 -N ...
bowtie2 error written 5.9 years ago by zhhxu910 • updated 3.3 years ago by micro32uvas10

Latest awards to zhhxu9

Popular Question 5.9 years ago, created a question with more than 1,000 views. For Error with bowtie2
Popular Question 5.9 years ago, created a question with more than 1,000 views. For One question about using bowtie2 in genome mapping

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