User: Lavanya

gravatar for Lavanya
Lavanya50
Reputation:
50
Status:
New User
Location:
chennai
Last seen:
5 years, 6 months ago
Joined:
8 years ago
Email:
l********@yahoo.com

Posts by Lavanya

<prev • 6 results • page 1 of 1 • next >
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Comment: C: Molecular Dynamics Simulation
... Thanks for the answer. In DS I have run a simulation for 0.5ns for a membrane protein complexed with a ligand..In desmond I have setup a 5 ns simulationf or a 355 amino acid protein complexed with a ligand.. 2 different proteins and 2 diff softwares... yet I am not going to compare the softwares. I ...
written 5.5 years ago by Lavanya50
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Molecular Dynamics Simulation
... Dear All, I have modelled a membrane protein and a globular protein and docked them with few natural compounds that we identified. after docking, I thought of simulating both the protein complexes. The membrane protein could not be simulated in desmond, so I am trying discovery studio for it.( Du ...
simulation written 5.5 years ago by Lavanya50 • updated 5.5 years ago by vijay1.5k
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Molecular Dynamics Simulation
... Dear All, I have modelled a membrane protein and a globular protein and docked them with few natural compounds that we identified. after docking, I thought of simulating both the protein complexes. 1) The membrane protein could not be simulated in desmond, so I am trying discovery studio for it.( ...
written 5.5 years ago by Lavanya50 • updated 5.5 years ago by Michael Dondrup45k
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Can I Write A Research Paper Based On The Results Of Comparing Computational Predictions Of Two Proteins
... I have modelled a membrane protein using Insight-2 and glide's-prime. In insight - 2 I have modelled the whole protein, whereas in glide-prime I modeeled only a particular region. can I communicate this work as a comparison of prediction by these 2 methods? or can anyone suggest how I can frame thes ...
publication written 5.9 years ago by Lavanya50 • updated 5.8 years ago by justinhaselbach250
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Joining Of Models
... Hi I have 4 models generated by Phyre for my protein. My protein is a transmembrane one for which no structure is available. Now i need to join 4 models. what is the method i must follow? ...
model written 8.1 years ago by Lavanya50 • updated 8.1 years ago by Rm7.8k
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Finding A Suitable Template For Homology Modeling
... Hi I have a sequence for which I could not find a suitable template to model. Is there any other method to generate a 3D structure? I submitted to 3D-PSSM but could not get an appropriate template. So can you tell me how to find a suitable template? ...
homology protein structure written 8.1 years ago by Lavanya50 • updated 8.1 years ago by Jan Kosinski1.6k

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