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Posts by madhu9ram
Forum: ligand optimization method
... what is the best method or tool for ligand optimization in molecular docking study ...
... I'm confusing on ligand optimization . I have used gabedit software for this, Very first I have drew my compound after that I choose these option in gabedit - Set atom types,Molecular Mechanics(look for lower energy conformtion) - MM gradient point optimization - Minimization-Molecular dynamics ...
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