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3
votes
3
replies
901
views
Unexpected read length from NGS
NGS
Illumina
13 months ago by
QX
▴ 70
0
votes
0
replies
994
views
Comment:
Comment: Why gatk VariantAnnotator required bam and coverage files
14 months ago by
QX
▴ 70
0
votes
1
reply
994
views
Comment:
Comment: Why gatk VariantAnnotator required bam and coverage files
14 months ago by
QX
▴ 70
3
votes
4
replies
994
views
Why gatk VariantAnnotator required bam and coverage files
gatk
VariantAnnotator
14 months ago by
QX
▴ 70
0
votes
0
replies
319
views
Add geno header to VariantAnnotation objects
nichenet
scRNA-seq
15 months ago by
QX
▴ 70
0
votes
0
replies
624
views
Comment:
Comment: Cell communacations analysis. I only have the proteome of one type of cell
15 months ago by
QX
▴ 70
0
votes
0
replies
305
views
NicheNet cell-cell communication analysis outcome
nichenet
scRNA-seq
15 months ago by
QX
▴ 70
0
votes
0
replies
1.1k
views
Comment:
Comment: Annotate genes from gtf file to vcf file
15 months ago by
QX
▴ 70
2
votes
3
replies
1.1k
views
Annotate genes from gtf file to vcf file
gtf
genomics
vcf
15 months ago by
QX
▴ 70
0
votes
0
replies
2.3k
views
Comment:
Comment: Adding gene symbol to GRanges for calculation purposes
15 months ago by
QX
▴ 70
0
votes
1
reply
504
views
Adding gene to GRange objects with single base
GRanges
genomics
updated 15 months ago by
ATpoint
88k • written 15 months ago by
QX
▴ 70
0
votes
1
reply
460
views
SNP and Genes position matching dataframes in R
R
dataframe
updated 16 months ago by
dthorbur
★ 3.0k • written 16 months ago by
QX
▴ 70
2
votes
1
reply
424
views
Computing the neighborhood graph in single cell pipeline
single-cell
knn
updated 16 months ago by
ATpoint
88k • written 16 months ago by
QX
▴ 70
0
votes
2
replies
890
views
Visualize and access gvcf/vcf files
genomics
vcf
updated 12 months ago by
venkat
▴ 10 • written 16 months ago by
QX
▴ 70
0
votes
0
replies
1.4k
views
Comment:
Comment: batch effect correction in 10x genomics single cell sequencing
17 months ago by
QX
▴ 70
0
votes
3
replies
1.4k
views
Comment:
Comment: batch effect correction in 10x genomics single cell sequencing
18 months ago by
QX
▴ 70
0
votes
0
replies
1.7k
views
Comment:
Comment: problem with importing mtx file in scanpy
18 months ago by
QX
▴ 70
0
votes
2
replies
1.7k
views
problem with importing mtx file in scanpy
scanpy
scRNAseq
18 months ago by
QX
▴ 70
0
votes
0
replies
1.8k
views
Answer:
Answer: How can I call somatic CNV in tumor samples with no normal samples?
19 months ago by
QX
▴ 70
1
vote
1
reply
703
views
Variant calling using HaplotypeCaller does not show #FILTER information
Variant-calling
GATK
HaplotypeCaller
WGS
updated 19 months ago by
Ram
45k • written 19 months ago by
QX
▴ 70
0
votes
0
replies
920
views
Comment:
Comment: Execute R command on specific termimal
19 months ago by
QX
▴ 70
5
votes
2
replies
920
views
Execute R command on specific termimal
R
updated 19 months ago by
Ram
45k • written 19 months ago by
QX
▴ 70
0
votes
0
replies
1.7k
views
Comment:
Comment: Downstream analysis with DEseq2 normalization
20 months ago by
QX
▴ 70
0
votes
1
reply
1.7k
views
Comment:
Comment: Downstream analysis with DEseq2 normalization
20 months ago by
QX
▴ 70
0
votes
0
replies
954
views
Comment:
Comment: Normalization function in DEseq2
20 months ago by
QX
▴ 70
3
votes
4
replies
1.7k
views
Downstream analysis with DEseq2 normalization
DEseq2
integration
20 months ago by
QX
▴ 70
4
votes
2
replies
954
views
Normalization function in DEseq2
DEseq2
20 months ago by
QX
▴ 70
0
votes
0
replies
486
views
What is the difference between CNV binning and aligning to gene?
CNV
transcriptomics
20 months ago by
QX
▴ 70
2
votes
1
reply
737
views
Integrate proteomics and scRNA-seq datasets
scRNA-seq
omics
protemics
updated 23 months ago by
bk11
★ 3.1k • written 23 months ago by
QX
▴ 70
1
vote
0
replies
1.2k
views
Comment:
Comment: Integrate transcriptomics and CNV
23 months ago by
QX
▴ 70
0
votes
1
reply
1.2k
views
Comment:
Comment: Integrate transcriptomics and CNV
23 months ago by
QX
▴ 70
3
votes
4
replies
1.2k
views
Integrate transcriptomics and CNV
CNV
omics
23 months ago by
QX
▴ 70
0
votes
0
replies
384
views
Normalization of NGS data to make CNV calls
CNV
Normalization
WGS
23 months ago by
QX
▴ 70
133 results • Page
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