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3
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2
replies
302
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Alignment algorithm for DNA sequencing
sequencing
data
DNA
updated 8 days ago by
ATpoint
87k • written 8 days ago by
QX
▴ 70
0
votes
0
replies
544
views
Comment:
Comment: Is there a proper way to choose bins in barplot
9 weeks ago by
QX
▴ 70
0
votes
1
reply
544
views
Comment:
Comment: Is there a proper way to choose bins in barplot
9 weeks ago by
QX
▴ 70
0
votes
0
replies
544
views
Comment:
Comment: Is there a proper way to choose bins in barplot
9 weeks ago by
QX
▴ 70
3
votes
6
replies
544
views
Is there a proper way to choose bins in barplot
visualization
plot
bar
9 weeks ago by
QX
▴ 70
1
vote
0
replies
599
views
Answer:
Answer: CNV Analysis and Visualisation
10 weeks ago by
QX
▴ 70
2
votes
2
replies
334
views
statistical testing for MS/MS proteomics bulk samples
DEG
proteomics
updated 4 months ago by
ATpoint
87k • written 4 months ago by
QX
▴ 70
0
votes
0
replies
1.2k
views
Comment:
Comment: Gatk haplotyper
4 months ago by
QX
▴ 70
0
votes
1
reply
632
views
Comment:
Comment: coordinate vs contributions for the variables in PCA using FactoMineR
5 months ago by
QX
▴ 70
0
votes
0
replies
632
views
Comment:
Comment: coordinate vs contributions for the variables in PCA using FactoMineR
5 months ago by
QX
▴ 70
2
votes
4
replies
632
views
coordinate vs contributions for the variables in PCA using FactoMineR
PCA
updated 5 months ago by
Bastien Hervé
6.1k • written 5 months ago by
QX
▴ 70
0
votes
0
replies
899
views
Comment:
Comment: PCA for count data
5 months ago by
QX
▴ 70
0
votes
0
replies
899
views
Comment:
Comment: PCA for count data
5 months ago by
QX
▴ 70
0
votes
1
reply
899
views
Comment:
Comment: PCA for count data
5 months ago by
QX
▴ 70
3
votes
6
replies
899
views
PCA for count data
PCA
5 months ago by
QX
▴ 70
0
votes
0
replies
677
views
Comment:
Comment: DEseq2 with different designs matrix
6 months ago by
QX
▴ 70
0
votes
3
replies
677
views
DEseq2 with different designs matrix
DEseq2
6 months ago by
QX
▴ 70
0
votes
0
replies
240
views
Different position for same gene using annotatePeak from ChIPseeker
ChIPseeker
ATACseq
6 months ago by
QX
▴ 70
0
votes
0
replies
230
views
plotHeatmap from deeptools explain
atac-seq
6 months ago by
QX
▴ 70
0
votes
0
replies
1.2k
views
Comment:
Comment: difference between macs2 callpeak using bam and bed file
7 months ago by
QX
▴ 70
1
vote
1
reply
1.2k
views
Comment:
Comment: difference between macs2 callpeak using bam and bed file
7 months ago by
QX
▴ 70
5
votes
4
replies
1.2k
views
difference between macs2 callpeak using bam and bed file
macs2
atac-seq
7 months ago by
QX
▴ 70
0
votes
0
replies
669
views
Comment:
Comment: trimming 151bp to shorter k-mer in ATAC-seq analysis
7 months ago by
QX
▴ 70
0
votes
0
replies
3.6k
views
Comment:
Comment: ATAC-seq peak calling
7 months ago by
QX
▴ 70
0
votes
1
reply
784
views
Comment:
Comment: call peak for all replicates in all conditions using macs2
7 months ago by
QX
▴ 70
0
votes
0
replies
784
views
Comment:
Comment: call peak for all replicates in all conditions using macs2
7 months ago by
QX
▴ 70
0
votes
1
reply
669
views
Comment:
Comment: trimming 151bp to shorter k-mer in ATAC-seq analysis
7 months ago by
QX
▴ 70
2
votes
5
replies
784
views
call peak for all replicates in all conditions using macs2
macs2
ATACseq
updated 7 months ago by
zau saa
▴ 150 • written 7 months ago by
QX
▴ 70
0
votes
0
replies
2.3k
views
Comment:
Comment: How get density plot TSS region for genes of interest
7 months ago by
QX
▴ 70
1
vote
4
replies
669
views
trimming 151bp to shorter k-mer in ATAC-seq analysis
ATAC-seq
7 months ago by
QX
▴ 70
0
votes
0
replies
10k
views
Comment:
Comment: Using featureCounts and DESeq2 to look at differences between ATAC-seq condition
7 months ago by
QX
▴ 70
0
votes
1
reply
2.3k
views
Comment:
Comment: How get density plot TSS region for genes of interest
7 months ago by
QX
▴ 70
0
votes
1
reply
1.2k
views
Comment:
Comment: which bed file should be used for deeptools computeMatrix
7 months ago by
QX
▴ 70
0
votes
1
reply
1.2k
views
Comment:
Comment: which bed file should be used for deeptools computeMatrix
7 months ago by
QX
▴ 70
3
votes
6
replies
1.2k
views
which bed file should be used for deeptools computeMatrix
atac-seq
deeptools
updated 7 months ago by
Ming Tommy Tang
★ 4.6k • written 7 months ago by
QX
▴ 70
0
votes
0
replies
2.2k
views
Comment:
Comment: Plotting chip signal at TSSs with deeptools
7 months ago by
QX
▴ 70
0
votes
0
replies
274
views
reference-point setting from computeMatrix
ATACseq
7 months ago by
QX
▴ 70
0
votes
0
replies
238
views
which distance used for kmeans in deeptools plotHeatmap
atac
deeptools
7 months ago by
QX
▴ 70
1
vote
1
reply
464
views
merge replicate for bigWig files from macs2 peak calling
ATAC-seq
updated 7 months ago by
ATpoint
87k • written 7 months ago by
QX
▴ 70
0
votes
0
replies
673
views
Comment:
Comment: MACS2 for multiple conditions in ATACseq analysis
7 months ago by
QX
▴ 70
0
votes
1
reply
673
views
Comment:
Comment: MACS2 for multiple conditions in ATACseq analysis
7 months ago by
QX
▴ 70
0
votes
0
replies
6.6k
views
Comment:
Comment: How to create SAF from text file for FeatureCounts
7 months ago by
QX
▴ 70
0
votes
1
reply
1.1k
views
Comment:
Comment: featureCounts output
7 months ago by
QX
▴ 70
4
votes
4
replies
673
views
MACS2 for multiple conditions in ATACseq analysis
mac2
7 months ago by
QX
▴ 70
4
votes
4
replies
879
views
Increase the memory and core usage of R
R
updated 7 months ago by
Mensur Dlakic
★ 29k • written 7 months ago by
QX
▴ 70
0
votes
0
replies
655
views
Comment:
Comment: is that statistical correct to use DEseq2 for proteomics data
7 months ago by
QX
▴ 70
3
votes
2
replies
655
views
is that statistical correct to use DEseq2 for proteomics data
proteomics
DEseq2
updated 7 months ago by
ATpoint
87k • written 7 months ago by
QX
▴ 70
0
votes
0
replies
879
views
Comment:
Comment: Increase the memory and core usage of R
7 months ago by
QX
▴ 70
1
vote
0
replies
1.1k
views
Comment:
Comment: featureCounts output
8 months ago by
QX
▴ 70
4
votes
8
replies
1.1k
views
featureCounts output
macs2
featureCounts
updated 7 months ago by
rfran010
★ 1.4k • written 8 months ago by
QX
▴ 70
122 results • Page
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