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2
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2
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191
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statistical testing for MS/MS proteomics bulk samples
DEG
proteomics
updated 10 days ago by
ATpoint
85k • written 10 days ago by
QX
▴ 60
0
votes
0
replies
635
views
Comment:
Comment: Gatk haplotyper
10 days ago by
QX
▴ 60
0
votes
1
reply
324
views
Comment:
Comment: coordinate vs contributions for the variables in PCA using FactoMineR
15 days ago by
QX
▴ 60
0
votes
0
replies
324
views
Comment:
Comment: coordinate vs contributions for the variables in PCA using FactoMineR
15 days ago by
QX
▴ 60
2
votes
4
replies
324
views
coordinate vs contributions for the variables in PCA using FactoMineR
PCA
updated 15 days ago by
Bastien Hervé
5.8k • written 15 days ago by
QX
▴ 60
0
votes
0
replies
462
views
Comment:
Comment: PCA for count data
23 days ago by
QX
▴ 60
0
votes
0
replies
462
views
Comment:
Comment: PCA for count data
23 days ago by
QX
▴ 60
0
votes
1
reply
462
views
Comment:
Comment: PCA for count data
23 days ago by
QX
▴ 60
3
votes
6
replies
462
views
PCA for count data
PCA
23 days ago by
QX
▴ 60
0
votes
0
replies
458
views
Comment:
Comment: DEseq2 with different designs matrix
9 weeks ago by
QX
▴ 60
0
votes
3
replies
458
views
DEseq2 with different designs matrix
DEseq2
9 weeks ago by
QX
▴ 60
0
votes
0
replies
148
views
Different position for same gene using annotatePeak from ChIPseeker
ChIPseeker
ATACseq
10 weeks ago by
QX
▴ 60
0
votes
0
replies
153
views
plotHeatmap from deeptools explain
atac-seq
10 weeks ago by
QX
▴ 60
0
votes
0
replies
543
views
Comment:
Comment: difference between macs2 callpeak using bam and bed file
11 weeks ago by
QX
▴ 60
1
vote
1
reply
543
views
Comment:
Comment: difference between macs2 callpeak using bam and bed file
11 weeks ago by
QX
▴ 60
5
votes
4
replies
543
views
difference between macs2 callpeak using bam and bed file
macs2
atac-seq
11 weeks ago by
QX
▴ 60
0
votes
0
replies
388
views
Comment:
Comment: trimming 151bp to shorter k-mer in ATAC-seq analysis
11 weeks ago by
QX
▴ 60
0
votes
0
replies
3.2k
views
Comment:
Comment: ATAC-seq peak calling
11 weeks ago by
QX
▴ 60
0
votes
1
reply
465
views
Comment:
Comment: call peak for all replicates in all conditions using macs2
11 weeks ago by
QX
▴ 60
0
votes
0
replies
465
views
Comment:
Comment: call peak for all replicates in all conditions using macs2
11 weeks ago by
QX
▴ 60
0
votes
1
reply
388
views
Comment:
Comment: trimming 151bp to shorter k-mer in ATAC-seq analysis
11 weeks ago by
QX
▴ 60
2
votes
5
replies
465
views
call peak for all replicates in all conditions using macs2
macs2
ATACseq
updated 11 weeks ago by
zau saa
▴ 150 • written 12 weeks ago by
QX
▴ 60
0
votes
0
replies
2.0k
views
Comment:
Comment: How get density plot TSS region for genes of interest
12 weeks ago by
QX
▴ 60
1
vote
4
replies
388
views
trimming 151bp to shorter k-mer in ATAC-seq analysis
ATAC-seq
11 weeks ago by
QX
▴ 60
0
votes
0
replies
9.4k
views
Comment:
Comment: Using featureCounts and DESeq2 to look at differences between ATAC-seq condition
12 weeks ago by
QX
▴ 60
0
votes
1
reply
2.0k
views
Comment:
Comment: How get density plot TSS region for genes of interest
12 weeks ago by
QX
▴ 60
0
votes
1
reply
619
views
Comment:
Comment: which bed file should be used for deeptools computeMatrix
3 months ago by
QX
▴ 60
0
votes
1
reply
619
views
Comment:
Comment: which bed file should be used for deeptools computeMatrix
3 months ago by
QX
▴ 60
3
votes
6
replies
619
views
which bed file should be used for deeptools computeMatrix
atac-seq
deeptools
updated 3 months ago by
Ming Tommy Tang
★ 4.5k • written 3 months ago by
QX
▴ 60
0
votes
0
replies
2.0k
views
Comment:
Comment: Plotting chip signal at TSSs with deeptools
3 months ago by
QX
▴ 60
0
votes
0
replies
181
views
reference-point setting from computeMatrix
ATACseq
3 months ago by
QX
▴ 60
0
votes
0
replies
147
views
which distance used for kmeans in deeptools plotHeatmap
atac
deeptools
3 months ago by
QX
▴ 60
1
vote
1
reply
254
views
merge replicate for bigWig files from macs2 peak calling
ATAC-seq
updated 3 months ago by
ATpoint
85k • written 3 months ago by
QX
▴ 60
0
votes
0
replies
360
views
Comment:
Comment: MACS2 for multiple conditions in ATACseq analysis
3 months ago by
QX
▴ 60
0
votes
1
reply
360
views
Comment:
Comment: MACS2 for multiple conditions in ATACseq analysis
3 months ago by
QX
▴ 60
0
votes
0
replies
6.0k
views
Comment:
Comment: How to create SAF from text file for FeatureCounts
3 months ago by
QX
▴ 60
0
votes
1
reply
569
views
Comment:
Comment: featureCounts output
3 months ago by
QX
▴ 60
4
votes
4
replies
360
views
MACS2 for multiple conditions in ATACseq analysis
mac2
3 months ago by
QX
▴ 60
4
votes
4
replies
563
views
Increase the memory and core usage of R
R
updated 3 months ago by
Mensur Dlakic
★ 28k • written 3 months ago by
QX
▴ 60
0
votes
0
replies
417
views
Comment:
Comment: is that statistical correct to use DEseq2 for proteomics data
3 months ago by
QX
▴ 60
3
votes
2
replies
417
views
is that statistical correct to use DEseq2 for proteomics data
proteomics
DEseq2
updated 3 months ago by
ATpoint
85k • written 3 months ago by
QX
▴ 60
0
votes
0
replies
563
views
Comment:
Comment: Increase the memory and core usage of R
3 months ago by
QX
▴ 60
1
vote
0
replies
569
views
Comment:
Comment: featureCounts output
3 months ago by
QX
▴ 60
4
votes
8
replies
569
views
featureCounts output
macs2
featureCounts
updated 3 months ago by
rfran010
★ 1.3k • written 3 months ago by
QX
▴ 60
0
votes
0
replies
569
views
Comment:
Comment: featureCounts output
3 months ago by
QX
▴ 60
0
votes
0
replies
569
views
Comment:
Comment: featureCounts output
3 months ago by
QX
▴ 60
0
votes
1
reply
503
views
Comment:
Comment: input for gatk VariantAnnotator --dbsnp
3 months ago by
QX
▴ 60
0
votes
0
replies
503
views
Comment:
Comment: input for gatk VariantAnnotator --dbsnp
3 months ago by
QX
▴ 60
0
votes
1
reply
503
views
Comment:
Comment: input for gatk VariantAnnotator --dbsnp
3 months ago by
QX
▴ 60
2
votes
6
replies
503
views
input for gatk VariantAnnotator --dbsnp
VariantAnnotator
gatk
updated 3 months ago by
GenoMax
147k • written 3 months ago by
QX
▴ 60
116 results • Page
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