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Comment: Comment: featureCounts output
9 months ago by QX ▴ 70
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0
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1.2k
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Comment: Comment: featureCounts output
9 months ago by QX ▴ 70
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1
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1.1k
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Comment: Comment: input for gatk VariantAnnotator --dbsnp
10 months ago by QX ▴ 70
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1.1k
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Comment: Comment: input for gatk VariantAnnotator --dbsnp
10 months ago by QX ▴ 70
0
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1
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1.1k
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Comment: Comment: input for gatk VariantAnnotator --dbsnp
10 months ago by QX ▴ 70
2
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6
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1.1k
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input for gatk VariantAnnotator --dbsnp
VariantAnnotator gatk
updated 10 months ago by 151k • written 10 months ago by ▴ 70
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0
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1.3k
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Comment: Comment: best way to submit hpc job using snakemake
10 months ago by QX ▴ 70
0
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1
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1.3k
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Comment: Comment: best way to submit hpc job using snakemake
10 months ago by QX ▴ 70
5
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5
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1.3k
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best way to submit hpc job using snakemake
snakemake
10 months ago by QX ▴ 70
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1
reply
588
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Comment: Comment: snakemake config file with path
10 months ago by QX ▴ 70
1
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3
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588
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snakemake config file with path
snakemake
updated 10 months ago by ▴ 140 • written 10 months ago by ▴ 70
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2
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500
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how to colorize snakemake editing text
snakemake
updated 10 months ago by 55k • written 10 months ago by ▴ 70
1
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1
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659
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Comment: Comment: Any recommended way to view scRNAseq results in an interactive format?
10 months ago by QX ▴ 70
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1.4k
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Comment: Comment: Calling variants/SNP for single-cell RNA-seq data
10 months ago by QX ▴ 70
3
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5
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1.4k
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Calling variants/SNP for single-cell RNA-seq data
SNP scRNAseq
updated 8 months ago by ▴ 770 • written 10 months ago by ▴ 70
2
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1
reply
436
views
Split the fastqc file base on barcode
fastq
updated 11 months ago by 151k • written 11 months ago by ▴ 70
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0
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793
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Comment: Comment: bash for merging bam files by samtools
11 months ago by QX ▴ 70
0
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0
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813
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Comment: Comment: scRNA integration problem with cluster not being separated
11 months ago by QX ▴ 70
2
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3
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793
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bash for merging bam files by samtools
samtools
updated 11 months ago by 151k • written 11 months ago by ▴ 70
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0
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979
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Comment: Comment: chIP-seq vs ATACseq analysis
11 months ago by QX ▴ 70
5
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3
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979
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chIP-seq vs ATACseq analysis
ATACseq
11 months ago by QX ▴ 70
0
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1
reply
952
views
invalid class “Assay” object issue from Seurat
seurat
updated 11 months ago by ★ 3.1k • written 11 months ago by ▴ 70
0
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1
reply
813
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Comment: Comment: scRNA integration problem with cluster not being separated
11 months ago by QX ▴ 70
8
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3
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1.0k
views
conda-like env for R
R conda
updated 11 months ago by ★ 3.0k • written 11 months ago by ▴ 70
0
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0
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6.5k
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Comment: Comment: Different bigwig file sizes between BedgraphToBigwig and bamCoverage
11 months ago by QX ▴ 70
0
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1
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6.5k
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Comment: Comment: Different bigwig file sizes between BedgraphToBigwig and bamCoverage
11 months ago by QX ▴ 70
2
votes
1
reply
470
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Trimming from 151bp to 65bp
sequencing data
updated 11 months ago by 151k • written 11 months ago by ▴ 70
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0
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1.3k
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Comment: Comment: Asking for parallel jobs setting on HPC when analyzing sequencing data
11 months ago by QX ▴ 70
0
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1
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1.3k
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Comment: Comment: Asking for parallel jobs setting on HPC when analyzing sequencing data
11 months ago by QX ▴ 70
0
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0
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1.3k
views
Comment: Comment: Asking for parallel jobs setting on HPC when analyzing sequencing data
11 months ago by QX ▴ 70
0
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2
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1.3k
views
Comment: Comment: Asking for parallel jobs setting on HPC when analyzing sequencing data
11 months ago by QX ▴ 70
5
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11
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1.3k
views
6 follow
Asking for parallel jobs setting on HPC when analyzing sequencing data
HPC parallel
updated 11 months ago by 4.7k • written 11 months ago by ▴ 70
0
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1
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7.7k
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Comment: Comment: Difference between proper paired reads and mapped and paired reads
11 months ago by QX ▴ 70
0
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0
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862
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Comment: Comment: cannot conda install macs3 on linux
11 months ago by QX ▴ 70
4
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2
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862
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cannot conda install macs3 on linux
atac macs3
11 months ago by QX ▴ 70
0
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1
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1.1k
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Comment: Comment: How to scrape BioMart data from https://sorfs.ugent.be/ website
11 months ago by QX ▴ 70
3
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5
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1.1k
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How to scrape BioMart data from https://sorfs.ugent.be/ website
BioMart
updated 11 months ago by 166k • written 11 months ago by ▴ 70
0
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0
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1.1k
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Comment: Comment: How to scrape BioMart data from https://sorfs.ugent.be/ website
11 months ago by QX ▴ 70
0
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0
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795
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Comment: Comment: Unexpected read length from NGS
11 months ago by QX ▴ 70
3
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3
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795
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Unexpected read length from NGS
NGS Illumina
11 months ago by QX ▴ 70
0
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0
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890
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Comment: Comment: Why gatk VariantAnnotator required bam and coverage files
12 months ago by QX ▴ 70
0
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1
reply
890
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Comment: Comment: Why gatk VariantAnnotator required bam and coverage files
12 months ago by QX ▴ 70
3
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4
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890
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Why gatk VariantAnnotator required bam and coverage files
gatk VariantAnnotator
12 months ago by QX ▴ 70
0
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0
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268
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Add geno header to VariantAnnotation objects
nichenet scRNA-seq
13 months ago by QX ▴ 70
0
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0
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554
views
Comment: Comment: Cell communacations analysis. I only have the proteome of one type of cell
13 months ago by QX ▴ 70
0
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0
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254
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NicheNet cell-cell communication analysis outcome
nichenet scRNA-seq
13 months ago by QX ▴ 70
0
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0
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982
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Comment: Comment: Annotate genes from gtf file to vcf file
14 months ago by QX ▴ 70
2
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3
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982
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Annotate genes from gtf file to vcf file
gtf genomics vcf
14 months ago by QX ▴ 70
0
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0
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2.2k
views
Comment: Comment: Adding gene symbol to GRanges for calculation purposes
14 months ago by QX ▴ 70
0
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1
reply
435
views
Adding gene to GRange objects with single base
GRanges genomics
updated 14 months ago by 88k • written 14 months ago by ▴ 70
122 results • Page 2 of 3
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