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merge replicate for bigWig files from macs2 peak calling
ATAC-seq
updated 15 months ago by 90k • written 15 months ago by ▴ 80
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1.2k
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Comment: Comment: MACS2 for multiple conditions in ATACseq analysis
15 months ago by QX ▴ 80
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1
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1.2k
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Comment: Comment: MACS2 for multiple conditions in ATACseq analysis
15 months ago by QX ▴ 80
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0
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7.8k
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Comment: Comment: How to create SAF from text file for FeatureCounts
15 months ago by QX ▴ 80
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1
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1.8k
views
Comment: Comment: featureCounts output
15 months ago by QX ▴ 80
4
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4
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1.2k
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MACS2 for multiple conditions in ATACseq analysis
mac2
15 months ago by QX ▴ 80
4
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4
replies
1.3k
views
Increase the memory and core usage of R
R
updated 15 months ago by ★ 30k • written 15 months ago by ▴ 80
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0
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1.0k
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Comment: Comment: is that statistical correct to use DEseq2 for proteomics data
15 months ago by QX ▴ 80
3
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2
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1.0k
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is that statistical correct to use DEseq2 for proteomics data
proteomics DEseq2
updated 15 months ago by 90k • written 15 months ago by ▴ 80
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0
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1.3k
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Comment: Comment: Increase the memory and core usage of R
15 months ago by QX ▴ 80
1
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0
replies
1.8k
views
Comment: Comment: featureCounts output
16 months ago by QX ▴ 80
4
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8
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1.8k
views
featureCounts output
macs2 featureCounts
updated 15 months ago by ★ 1.7k • written 16 months ago by ▴ 80
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0
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1.8k
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Comment: Comment: featureCounts output
16 months ago by QX ▴ 80
0
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0
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1.8k
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Comment: Comment: featureCounts output
16 months ago by QX ▴ 80
0
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1
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1.7k
views
Comment: Comment: input for gatk VariantAnnotator --dbsnp
16 months ago by QX ▴ 80
0
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0
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1.7k
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Comment: Comment: input for gatk VariantAnnotator --dbsnp
16 months ago by QX ▴ 80
0
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1
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1.7k
views
Comment: Comment: input for gatk VariantAnnotator --dbsnp
16 months ago by QX ▴ 80
2
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6
replies
1.7k
views
input for gatk VariantAnnotator --dbsnp
VariantAnnotator gatk
updated 16 months ago by 154k • written 16 months ago by ▴ 80
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0
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2.0k
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Comment: Comment: best way to submit hpc job using snakemake
16 months ago by QX ▴ 80
0
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1
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2.0k
views
Comment: Comment: best way to submit hpc job using snakemake
16 months ago by QX ▴ 80
5
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5
replies
2.0k
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best way to submit hpc job using snakemake
snakemake
16 months ago by QX ▴ 80
0
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1
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874
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Comment: Comment: snakemake config file with path
16 months ago by QX ▴ 80
1
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3
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874
views
snakemake config file with path
snakemake
updated 16 months ago by ▴ 140 • written 16 months ago by ▴ 80
0
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2
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821
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how to colorize snakemake editing text
snakemake
updated 16 months ago by 56k • written 16 months ago by ▴ 80
1
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1
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970
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Comment: Comment: Any recommended way to view scRNAseq results in an interactive format?
16 months ago by QX ▴ 80
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0
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2.2k
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Comment: Comment: Calling variants/SNP for single-cell RNA-seq data
16 months ago by QX ▴ 80
3
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5
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2.2k
views
Calling variants/SNP for single-cell RNA-seq data
SNP scRNAseq
updated 14 months ago by ▴ 870 • written 16 months ago by ▴ 80
2
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1
reply
638
views
Split the fastqc file base on barcode
fastq
updated 17 months ago by 154k • written 17 months ago by ▴ 80
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0
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1.2k
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Comment: Comment: bash for merging bam files by samtools
17 months ago by QX ▴ 80
0
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0
replies
1.2k
views
Comment: Comment: scRNA integration problem with cluster not being separated
17 months ago by QX ▴ 80
2
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3
replies
1.2k
views
bash for merging bam files by samtools
samtools
updated 17 months ago by 154k • written 17 months ago by ▴ 80
0
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0
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1.4k
views
Comment: Comment: chIP-seq vs ATACseq analysis
17 months ago by QX ▴ 80
5
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3
replies
1.4k
views
chIP-seq vs ATACseq analysis
ATACseq
17 months ago by QX ▴ 80
0
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1
reply
1.4k
views
invalid class “Assay” object issue from Seurat
seurat
updated 17 months ago by ★ 3.1k • written 17 months ago by ▴ 80
0
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1
reply
1.2k
views
Comment: Comment: scRNA integration problem with cluster not being separated
17 months ago by QX ▴ 80
8
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3
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1.5k
views
conda-like env for R
R conda
updated 17 months ago by ★ 3.1k • written 17 months ago by ▴ 80
0
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0
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7.4k
views
Comment: Comment: Different bigwig file sizes between BedgraphToBigwig and bamCoverage
17 months ago by QX ▴ 80
0
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1
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7.4k
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Comment: Comment: Different bigwig file sizes between BedgraphToBigwig and bamCoverage
17 months ago by QX ▴ 80
2
votes
1
reply
724
views
Trimming from 151bp to 65bp
sequencing data
updated 17 months ago by 154k • written 17 months ago by ▴ 80
0
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0
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1.9k
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Comment: Comment: Asking for parallel jobs setting on HPC when analyzing sequencing data
17 months ago by QX ▴ 80
0
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1
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1.9k
views
Comment: Comment: Asking for parallel jobs setting on HPC when analyzing sequencing data
17 months ago by QX ▴ 80
0
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0
replies
1.9k
views
Comment: Comment: Asking for parallel jobs setting on HPC when analyzing sequencing data
17 months ago by QX ▴ 80
0
votes
2
replies
1.9k
views
Comment: Comment: Asking for parallel jobs setting on HPC when analyzing sequencing data
17 months ago by QX ▴ 80
5
votes
11
replies
1.9k
views
6 follow
Asking for parallel jobs setting on HPC when analyzing sequencing data
HPC parallel
updated 17 months ago by 4.7k • written 17 months ago by ▴ 80
0
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1
reply
8.1k
views
Comment: Comment: Difference between proper paired reads and mapped and paired reads
17 months ago by QX ▴ 80
0
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0
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1.4k
views
Comment: Comment: cannot conda install macs3 on linux
17 months ago by QX ▴ 80
4
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2
replies
1.4k
views
cannot conda install macs3 on linux
atac macs3
17 months ago by QX ▴ 80
0
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1
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1.6k
views
Comment: Comment: How to scrape BioMart data from https://sorfs.ugent.be/ website
17 months ago by QX ▴ 80
3
votes
5
replies
1.6k
views
How to scrape BioMart data from https://sorfs.ugent.be/ website
BioMart
updated 17 months ago by 166k • written 18 months ago by ▴ 80
0
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0
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1.6k
views
Comment: Comment: How to scrape BioMart data from https://sorfs.ugent.be/ website
18 months ago by QX ▴ 80
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