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SNP and Genes position matching dataframes in R
R dataframe
updated 14 months ago by ★ 3.0k • written 14 months ago by ▴ 70
2
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1
reply
369
views
Computing the neighborhood graph in single cell pipeline
single-cell knn
updated 14 months ago by 88k • written 14 months ago by ▴ 70
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2
replies
745
views
Visualize and access gvcf/vcf files
genomics vcf
updated 10 months ago by ▴ 10 • written 14 months ago by ▴ 70
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0
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1.2k
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Comment: Comment: batch effect correction in 10x genomics single cell sequencing
16 months ago by QX ▴ 70
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3
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1.2k
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Comment: Comment: batch effect correction in 10x genomics single cell sequencing
16 months ago by QX ▴ 70
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0
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1.6k
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Comment: Comment: problem with importing mtx file in scanpy
16 months ago by QX ▴ 70
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2
replies
1.6k
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problem with importing mtx file in scanpy
scanpy scRNAseq
16 months ago by QX ▴ 70
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0
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1.5k
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Answer: Answer: How can I call somatic CNV in tumor samples with no normal samples?
17 months ago by QX ▴ 70
1
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1
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635
views
Variant calling using HaplotypeCaller does not show #FILTER information
Variant-calling GATK HaplotypeCaller WGS
updated 17 months ago by 45k • written 17 months ago by ▴ 70
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0
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768
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Comment: Comment: Execute R command on specific termimal
17 months ago by QX ▴ 70
5
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2
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768
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Execute R command on specific termimal
R
updated 17 months ago by 45k • written 17 months ago by ▴ 70
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0
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1.5k
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Comment: Comment: Downstream analysis with DEseq2 normalization
18 months ago by QX ▴ 70
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1
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1.5k
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Comment: Comment: Downstream analysis with DEseq2 normalization
18 months ago by QX ▴ 70
0
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0
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808
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Comment: Comment: Normalization function in DEseq2
18 months ago by QX ▴ 70
3
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4
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1.5k
views
Downstream analysis with DEseq2 normalization
DEseq2 integration
18 months ago by QX ▴ 70
4
votes
2
replies
808
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Normalization function in DEseq2
DEseq2
18 months ago by QX ▴ 70
0
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0
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416
views
What is the difference between CNV binning and aligning to gene?
CNV transcriptomics
18 months ago by QX ▴ 70
2
votes
1
reply
652
views
Integrate proteomics and scRNA-seq datasets
scRNA-seq omics protemics
updated 21 months ago by ★ 3.1k • written 21 months ago by ▴ 70
1
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0
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1.1k
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Comment: Comment: Integrate transcriptomics and CNV
21 months ago by QX ▴ 70
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1
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1.1k
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Comment: Comment: Integrate transcriptomics and CNV
21 months ago by QX ▴ 70
3
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4
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1.1k
views
Integrate transcriptomics and CNV
CNV omics
21 months ago by QX ▴ 70
0
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0
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367
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Normalization of NGS data to make CNV calls
CNV Normalization WGS
22 months ago by QX ▴ 70
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