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2
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3
replies
1.1k
views
Annotate genes from gtf file to vcf file
gtf genomics vcf
15 months ago by QX ▴ 70
0
votes
0
replies
2.3k
views
Comment: Comment: Adding gene symbol to GRanges for calculation purposes
15 months ago by QX ▴ 70
0
votes
1
reply
481
views
Adding gene to GRange objects with single base
GRanges genomics
updated 15 months ago by 88k • written 15 months ago by ▴ 70
0
votes
1
reply
440
views
SNP and Genes position matching dataframes in R
R dataframe
updated 15 months ago by ★ 3.0k • written 15 months ago by ▴ 70
2
votes
1
reply
406
views
Computing the neighborhood graph in single cell pipeline
single-cell knn
updated 15 months ago by 88k • written 15 months ago by ▴ 70
0
votes
2
replies
831
views
Visualize and access gvcf/vcf files
genomics vcf
updated 11 months ago by ▴ 10 • written 15 months ago by ▴ 70
0
votes
0
replies
1.4k
views
Comment: Comment: batch effect correction in 10x genomics single cell sequencing
17 months ago by QX ▴ 70
0
votes
3
replies
1.4k
views
Comment: Comment: batch effect correction in 10x genomics single cell sequencing
17 months ago by QX ▴ 70
0
votes
0
replies
1.7k
views
Comment: Comment: problem with importing mtx file in scanpy
17 months ago by QX ▴ 70
0
votes
2
replies
1.7k
views
problem with importing mtx file in scanpy
scanpy scRNAseq
17 months ago by QX ▴ 70
0
votes
0
replies
1.7k
views
Answer: Answer: How can I call somatic CNV in tumor samples with no normal samples?
18 months ago by QX ▴ 70
1
vote
1
reply
682
views
Variant calling using HaplotypeCaller does not show #FILTER information
Variant-calling GATK HaplotypeCaller WGS
updated 18 months ago by 45k • written 18 months ago by ▴ 70
0
votes
0
replies
881
views
Comment: Comment: Execute R command on specific termimal
18 months ago by QX ▴ 70
5
votes
2
replies
881
views
Execute R command on specific termimal
R
updated 18 months ago by 45k • written 18 months ago by ▴ 70
0
votes
0
replies
1.6k
views
Comment: Comment: Downstream analysis with DEseq2 normalization
19 months ago by QX ▴ 70
0
votes
1
reply
1.6k
views
Comment: Comment: Downstream analysis with DEseq2 normalization
19 months ago by QX ▴ 70
0
votes
0
replies
916
views
Comment: Comment: Normalization function in DEseq2
19 months ago by QX ▴ 70
3
votes
4
replies
1.6k
views
Downstream analysis with DEseq2 normalization
DEseq2 integration
19 months ago by QX ▴ 70
4
votes
2
replies
916
views
Normalization function in DEseq2
DEseq2
19 months ago by QX ▴ 70
0
votes
0
replies
474
views
What is the difference between CNV binning and aligning to gene?
CNV transcriptomics
19 months ago by QX ▴ 70
2
votes
1
reply
700
views
Integrate proteomics and scRNA-seq datasets
scRNA-seq omics protemics
updated 22 months ago by ★ 3.1k • written 22 months ago by ▴ 70
1
vote
0
replies
1.2k
views
Comment: Comment: Integrate transcriptomics and CNV
22 months ago by QX ▴ 70
0
votes
1
reply
1.2k
views
Comment: Comment: Integrate transcriptomics and CNV
22 months ago by QX ▴ 70
3
votes
4
replies
1.2k
views
Integrate transcriptomics and CNV
CNV omics
22 months ago by QX ▴ 70
0
votes
0
replies
377
views
Normalization of NGS data to make CNV calls
CNV Normalization WGS
23 months ago by QX ▴ 70
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