User: Mohammad Marhabaie
- New User
- United States
- Last seen:
- 8 months ago
- 5 years, 1 month ago
Posts by Mohammad Marhabaie
Answer: A: RSEM with STAR aligment
... Use --star-gzipped-read-file instead of --gzipped-read-file ! ...
... I have done several DE analyses at gene and transcript levels using edgeR and EBSeq and I found ~30% of transcriptome (~2100 genes out of ~7000, and ~3300 transcripts out of ~11000) is depleted from my experimental samples. The total read counts for these genes is about 5 million reads (out of ~17 ...
Latest awards to Mohammad Marhabaie
No awards yet. Soon to come :-)
Powered by Biostar version 2.3.0
Traffic: 1756 users visited in the last hour