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Showing :
questions
7
votes
7
replies
17k
views
How to write a list of DNAStringsets as a FASTA file in R
FASTA
DNAstringSet
R
updated 13 months ago by
Ram
43k • written 9.5 years ago by
newscient
▴ 20
0
votes
0
replies
1.0k
views
mapToTranscripts() with + and - strand regions
R
genome
GenomicFeatures
5.2 years ago by
newscient
▴ 20
2
votes
1
reply
2.9k
views
bigWigSummary with bed file for a specific amount of datapoints in output
UCSC
bigwig bed
summary
average
mean
updated 5.3 years ago by
Devon Ryan
104k • written 5.3 years ago by
newscient
▴ 20
5
votes
15
replies
2.9k
views
Plot average expression profile from one bed file across overlapping regions from another bed file in R
bed
R
bedtools
overlap
GRanges
updated 5.5 years ago by
Nicolas Rosewick
10k • written 5.5 years ago by
newscient
▴ 20
4
votes
8
replies
2.1k
views
Simulation of single-end reads from reference genome
simulation
reads
6.4 years ago by
newscient
▴ 20
4
votes
4
replies
4.2k
views
Histogram showing overlap between 2 bed files
histogram
overlap
6.4 years ago by
newscient
▴ 20
6
votes
3
replies
2.3k
views
Comprehensive gene annotation for drosophila melanogaster
genome
updated 6.8 years ago by
Jean-Karim Heriche
27k • written 6.8 years ago by
newscient
▴ 20
6
votes
3
replies
3.2k
views
Homology ratio comparison between different species
Homology
evolutionary-distance
updated 23 months ago by
Ram
43k • written 9.1 years ago by
newscient
▴ 20
5
votes
4
replies
7.1k
views
How to get gene names from CpG islands coordinates with R/Bioconductor
annotation
CpG
updated 15 months ago by
Ram
43k • written 9.1 years ago by
newscient
▴ 20
5
votes
5
replies
6.4k
views
True/False Positives/Negatives in R
condition-testing
ChIP-Seq
R
updated 23 months ago by
Ram
43k • written 9.1 years ago by
newscient
▴ 20
1
vote
2
replies
3.0k
views
Iterate with getBM(bioMart package) for GO annotation
getBM
gene-ontology
iteration
updated 24 months ago by
Ram
43k • written 9.2 years ago by
newscient
▴ 20
0
votes
0
replies
1.8k
views
Orthology search for multiple datasets from different organisms in R/Bioconductor
ChIP-Seq
Bioconductor
R
homology
updated 24 months ago by
Ram
43k • written 9.2 years ago by
newscient
▴ 20
2
votes
2
replies
3.2k
views
Iterate over Rangeddata in R with a for loop
ChIP-Seq
updated 2.0 years ago by
Ram
43k • written 9.2 years ago by
newscient
▴ 20
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