- New User
- Last seen:
- 1 month ago
- 3 years, 5 months ago
Profile information, website and location are not shown for new users.
This helps us discourage the inappropriate use of our site.
Posts by simo.aufiero
... Hi Spin, this is the command line that I used to perfom the analysis: python mapsplice.py -p 16 --bam -o mapsplice_out001 -c Chromosomes -x BowtieIndex/genome -1 paired-001.R1.fastq -2 paired-001.R2.fastq --gene-gtf gencode.vM16.annotation.gtf --fusion-non-canonical --filtering 1 --min-map-len 25 - ...
... Hi Guanghao Li, I had the same problem. I am running mapsplice using the genome reference mm10. I did the analysis in the past by using mm9 and mapsplice pipeline finished without any problem with that genome reference. What genome reference are you using? Simona ...
Latest awards to simo.aufiero
No awards yet. Soon to come :-)
Powered by Biostar version 2.3.0
Traffic: 880 users visited in the last hour