User: AriyurD

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AriyurD0
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Posts by AriyurD

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Segmentation fault error while using GATB
... Dear Rayan Currently, I am developing a tool using GATB. But when I work with big datasets I am running into segmentation faults. I am using a system with 1TB of memory and the maximum memory the tool uses (including the GATB) is just 3 GB (according to Valgrind). I ran one of the tool snippets you ...
gatb written 12 months ago by AriyurD0 • updated 12 months ago by Rayan Chikhi1.2k
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Comment: A: How To Separate Illumina Based Strand Specific Rna-Seq Alignments By Strand
... Hey Istavan I was working on this script. I divided my reads inot fwd and reverse strand reads using your code. When I visualized it using IGV, the reads of the reverse strand (i.e from file rev.bam) had an orientation F1R2 and the reads from the forward strand (fwd.bam) had an orientation F2R1. Bu ...
written 2.7 years ago by AriyurD0

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