User: Anima Mundi

gravatar for Anima Mundi
Anima Mundi2.2k
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Location:
Italy
Last seen:
5 days, 21 hours ago
Joined:
6 years, 8 months ago
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p***************@alice.it

Posts by Anima Mundi

<prev • 302 results • page 1 of 31 • next >
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Comment: C: Default password for Bio-Linux 8
... Hi torvilleg14, welcome. Actually this would not work, as in Bio-Linux 8 I was not asked to set any password. Really one should rely on a default password (which in this case is `manager`), thanks anyway! ...
written 8 weeks ago by Anima Mundi2.2k
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Comment: C: Learning some Drop-Seq as a first approach to RNA-Seq while on vacation
... Thanks genomax, it looks interesting! ...
written 11 weeks ago by Anima Mundi2.2k
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Learning some Drop-Seq as a first approach to RNA-Seq while on vacation
... Hi all, I would like to get a first glimpse about Drop-Seq data analysis, but I have no previous experience with RNA-Seq in general. To start familiarising with the topic, I was considering installing the software needed for some pipeline (e.g. this one) and then play a bit with a small dataset. How ...
tutorial drop-seq rna-seq hardware written 11 weeks ago by Anima Mundi2.2k
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Comment: C: The Biostar Handbook, a bioinformatics e-book for beginners
... Wonderful, congrats! ...
written 10 months ago by Anima Mundi2.2k
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Comment: C: Shortcuts for retrieving information on specific genomic loci from big SRA files
... Thanks. That time I did not manage to extract the information I wanted with the with the computing power I had. Next time I will try my luck with faster algorithms like those you suggest (or with better machines!). ...
written 13 months ago by Anima Mundi2.2k
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Comment: C: Detecting bacterial TSS from RNA-Seq data, how?
... Thanks. I would also say that even if optimized protocols are by definition better at finding TSSs, TSS information can still be extracted by conventional RNA-Seq pipelines. ...
written 13 months ago by Anima Mundi2.2k
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Comment: C: Detecting bacterial TSS from RNA-Seq data, how?
... Hello, this looks to me like a strong statement, could you please substantiate it? ...
written 13 months ago by Anima Mundi2.2k
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Comment: C: MutMap installation in Linux
... Hello arunpandey1, welcome. You should provide some more information, e.g. the Linux distro you are using, its version, name and extension of the downloaded file. ...
written 14 months ago by Anima Mundi2.2k
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Comment: C: Retrieving gene names from list of mRNA accession IDs
... Hello, if you know some Perl, maybe the [BioMart Perl API][1] might be useful for you. [1]: http://www.ensembl.org/info/data/biomart/biomart_perl_api.html ...
written 16 months ago by Anima Mundi2.2k
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Comment: C: JASPAR motifs download
... You can select *Homo sapiens* by using [its taxID][1], e.g. [here][2]. [1]: http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=9606 [2]: http://jaspar.genereg.net/cgi-bin/jaspar_db.pl **Edit:** the link for the human matrices just sends you to the homepage. To get the de ...
written 16 months ago by Anima Mundi2.2k

Latest awards to Anima Mundi

Librarian 3 months ago, created a post with more than 10 bookmarks. For Useful Bash Commands To Handle Fasta Files
Popular Question 3 months ago, created a question with more than 1,000 views. For Gene Coordinates For A Gene Family Members From The Mouse Genome
Great Question 4 months ago, created a question with more than 5,000 views. For How To Use Bedtools To Extract Promoters From A Mouse Bed File
Popular Question 4 months ago, created a question with more than 1,000 views. For Gene Coordinates For A Gene Family Members From The Mouse Genome
Popular Question 4 months ago, created a question with more than 1,000 views. For Literature-Based Interactomics Tool
Commentator 5 months ago, created a comment with at least 3 up-votes. For C: Should Fasta Be Capitalized?
Popular Question 5 months ago, created a question with more than 1,000 views. For Gene Coordinates For A Gene Family Members From The Mouse Genome
Popular Question 5 months ago, created a question with more than 1,000 views. For Literature-Based Interactomics Tool
Great Question 7 months ago, created a question with more than 5,000 views. For How To Use Bedtools To Extract Promoters From A Mouse Bed File
Popular Question 7 months ago, created a question with more than 1,000 views. For How To Display Old Assemblies Of The Mouse Genome In The Ensembl Genome Browser
Popular Question 7 months ago, created a question with more than 1,000 views. For Literature-Based Interactomics Tool
Popular Question 7 months ago, created a question with more than 1,000 views. For Gene Coordinates For A Gene Family Members From The Mouse Genome
Popular Question 8 months ago, created a question with more than 1,000 views. For Literature-Based Interactomics Tool
Popular Question 8 months ago, created a question with more than 1,000 views. For Gene Coordinates For A Gene Family Members From The Mouse Genome
Popular Question 9 months ago, created a question with more than 1,000 views. For Gene Coordinates For A Gene Family Members From The Mouse Genome
Great Question 10 months ago, created a question with more than 5,000 views. For Taking Only Aligned Sequences In A Blast
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Appreciated 11 months ago, created a post with more than 5 votes. For A: Is A Gap At The Same Position In Query And Template Possible?
Epic Question 11 months ago, created a question with more than 10,000 views. For Useful Bash Commands To Handle Fasta Files
Popular Question 12 months ago, created a question with more than 1,000 views. For Retrieve Genomic Ranges From Ensembl Genomes Using Gene Names
Popular Question 13 months ago, created a question with more than 1,000 views. For Obtaining Random Sequences From Genbank
Popular Question 13 months ago, created a question with more than 1,000 views. For Retrieve Genomic Ranges From Ensembl Genomes Using Gene Names
Popular Question 14 months ago, created a question with more than 1,000 views. For Retrieve Genomic Ranges From Ensembl Genomes Using Gene Names
Teacher 15 months ago, created an answer with at least 3 up-votes. For A: Is A Gap At The Same Position In Query And Template Possible?
Popular Question 15 months ago, created a question with more than 1,000 views. For Retrieve Genomic Ranges From Ensembl Genomes Using Gene Names

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