User: philippe.mcqt

gravatar for philippe.mcqt
Reputation:
30
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New User
Location:
Australia
Last seen:
3 years, 8 months ago
Joined:
5 years, 5 months ago
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p************@gmail.com

Posts by philippe.mcqt

<prev • 5 results • page 1 of 1 • next >
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Comment: C: Rearrangement of genome - can I try a local denovo assembly
... I have PEM reads. Thanks for suggestion I am looking into it. ...
written 3.9 years ago by philippe.mcqt30
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Answer: A: Can I identify a cell type by comparison with published transcriptomes of known
... Sincera seems like what you are looking for. I don't know of any 'ready to blast' tools that would allow to identify cell type. I think it might depends on what you are looking for, do you know what cell type you might have from the FACS analysis ? If so it is always possible to download similar exp ...
written 3.9 years ago by philippe.mcqt30
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Answer: A: how many read per sample give me good coverage for soybean rna sequensing with 1
... Sequencing depth is usually referenced to be the expected mean coverage at all loci over the target sequences, in the case of RNASeq experiements assuming all transcripts have similar level of expression. For researchers with a fixed budget, often a critical design question is wether to increase th ...
written 3.9 years ago by philippe.mcqt30
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Rearrangement of genome - can I try a local denovo assembly
... Hi, I have a bunch of WGS sequences for a variety of cultivars at a decent coverage (20X). I am interested in a specific region of the genome that I suspect as undergo rearrangement in resistant cultivars. I have alignment data to a reference that does not have the rearrangement. I would like to re ...
genome assembly sequencing written 3.9 years ago by philippe.mcqt30 • updated 3.9 years ago by bdelolmo10
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Comment: C: Migration of universe_wsgi.ini to galaxy.ini
... I just realized that. I am trying to remove that one and create a new one overthere. Thx ...
written 5.3 years ago by philippe.mcqt30

Latest awards to philippe.mcqt

Scholar 3.9 years ago, created an answer that has been accepted. For A: how many read per sample give me good coverage for soybean rna sequensing with 1
Teacher 3.9 years ago, created an answer with at least 3 up-votes. For A: how many read per sample give me good coverage for soybean rna sequensing with 1

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