User: mjoyraj

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mjoyraj80
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Taiwan
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2 months ago
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5 years, 11 months ago
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m******@gmail.com

Posts by mjoyraj

<prev • 80 results • page 1 of 8 • next >
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Comment: A: One way Anova to check rate variation among different regions of a protein is si
... Yes, actually test for checking difference between different proportions... ...
written 8 weeks ago by mjoyraj80
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One way Anova to check rate variation among different regions of a protein is significant or not
... I have a protein sequence, which may be divided into different functional regions. I calculated the rate variation in different functional regions of the protein (e.g. 7/18 = 0.38, 282/597 = 0.47, 59/111 = 0.53, 16/30 = 0.53, 20/37 = 0.54, and 11/30 = 0.36). I want to check if the rate variation amo ...
statistics written 8 weeks ago by mjoyraj80
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Comment: C: Fetching gene sequence from all human genomes
... Can I see access the genomes country-wise.... ...
written 6 months ago by mjoyraj80
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Fetching gene sequence from all human genomes
... I want to download gene sequence of a particular gene from all of the human genomes sequenced so far. The idea is to see the genetic variability of a particular gene among different Human population. Is their any tool available for this ? How to access all the human genomes sequenced so far ?? ...
sequence written 6 months ago by mjoyraj80 • updated 6 months ago by genomax90k
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Comment: C: How to set up a server for NGS analysis
... It's fine. You can close. ...
written 2.4 years ago by mjoyraj80
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Comment: C: How to set up a server for NGS analysis
... It is tough for me to get help from a system admin. I wonder if someone here has such experience. ...
written 2.4 years ago by mjoyraj80
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(Closed) How to set up a server for NGS analysis
... Hi all, I am a Biologist and I work with NGS data's. Previously I used to connect to a server using Putty where I have to give IP address, Port, Login id, and password and the connection type is SSH. Now I brought a server and it already have Windows 10. My plan is to do partition and also install L ...
software error written 2.4 years ago by mjoyraj80
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Comment: C: Labelling heatmap dendrogram
... Thanks for your suggestions. ...
written 4.5 years ago by mjoyraj80
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Comment: C: Labelling heatmap dendrogram
... I did it in another way, which may be partially okay. For example, I know I have 47 clusters, I choose to specify the color of the clusters rather than using the default color like this: install.packages("plyr") library(plyr) new_colors <- revalue(as.character(clusters_name), c("1"="yellow4", ...
written 4.5 years ago by mjoyraj80
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Labelling heatmap dendrogram
... Hi, can somebody help me fix this problem. I have gene expression data of 2314 genes for 15 conditions (alpha6; normalized and log2 transformed). I did hierarchical clustering of the genes based on expression and extracted clusters with the following scripts: hc <- hclust(dist(alpha6)) pdf("te ...
R rna-seq written 4.5 years ago by mjoyraj80 • updated 4.5 years ago by ivivek_ngs5.0k

Latest awards to mjoyraj

Popular Question 6 months ago, created a question with more than 1,000 views. For Need help with R-script for data sorting of tBLASTN result
Great Question 2.4 years ago, created a question with more than 5,000 views. For How transform FPKM values to Z-score using R
Great Question 2.4 years ago, created a question with more than 5,000 views. For Filtering gene expression correlation matrix in R
Popular Question 2.4 years ago, created a question with more than 1,000 views. For Need help with R-script for data sorting of tBLASTN result
Popular Question 2.4 years ago, created a question with more than 1,000 views. For Package for checking differential expression of gene
Popular Question 2.4 years ago, created a question with more than 1,000 views. For Cufflinks: Why in the skipped gtf file showed a portion of genome masked
Popular Question 2.4 years ago, created a question with more than 1,000 views. For Cufflinks run showing “Multihit not found”
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Great Question 4.5 years ago, created a question with more than 5,000 views. For Filtering gene expression correlation matrix in R
Popular Question 4.5 years ago, created a question with more than 1,000 views. For Cufflinks: Why in the skipped gtf file showed a portion of genome masked
Popular Question 4.5 years ago, created a question with more than 1,000 views. For Cufflinks run showing “Multihit not found”
Popular Question 4.5 years ago, created a question with more than 1,000 views. For How to replace a set of sequence ID's with another set of sequence ID's ??
Popular Question 4.5 years ago, created a question with more than 1,000 views. For How transform FPKM values to Z-score using R
Popular Question 4.5 years ago, created a question with more than 1,000 views. For Filtering gene expression correlation matrix in R
Popular Question 4.5 years ago, created a question with more than 1,000 views. For Cufflinks: Long time for assembly-"Waiting for 1 thread to complete"
Popular Question 4.5 years ago, created a question with more than 1,000 views. For How to use --max-bundle-frags option of cufflinks in Galaxy..??
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Popular Question 5.3 years ago, created a question with more than 1,000 views. For Filtering gene expression correlation matrix in R

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