Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Profile
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
Showing :
questions
0
votes
0
replies
413
views
Manta SV (specially Translocation)
manta
Structural-Variant
updated 7 months ago by
Ram
45k • written 7 months ago by
Nai
▴ 50
0
votes
0
replies
355
views
Variant Calling Issue
SV
SNV
updated 10 months ago by
GenoMax
154k • written 10 months ago by
Nai
▴ 50
0
votes
1
reply
680
views
#Bismark Methylation mapping Error
Bismark0.24
Multicore
Methylation
updated 21 months ago by
GenoMax
154k • written 21 months ago by
Nai
▴ 50
0
votes
0
replies
646
views
Density plot for Quantile and Quartile normalization in geomx workflow
GeoMX
workflow
2.2 years ago by
Nai
▴ 50
0
votes
2
replies
1.4k
views
GEOMX SPATIAL TRANSCRIPTOMICs
NGS
transcriptomics
ncounter
GEOMX
2.6 years ago by
Nai
▴ 50
0
votes
0
replies
555
views
Haploview Error
plink
Haploview
vep
2.6 years ago by
Nai
▴ 50
0
votes
0
replies
702
views
Haploview linkage format .ped and .info file error
plink
Haploview
vcftools
updated 2.4 years ago by
Ram
45k • written 2.6 years ago by
Nai
▴ 50
0
votes
0
replies
587
views
File has zero value indivuals
Haploview
updated 2.6 years ago by
Ram
45k • written 2.6 years ago by
Nai
▴ 50
0
votes
2
replies
1.4k
views
logFC is negative, need help to get it done
Limma
R
updated 2.7 years ago by
i.sudbery
22k • written 2.7 years ago by
Nai
▴ 50
0
votes
3
replies
1.3k
views
Third quartile normalized logFC data to find differentially express gene using limma
Limma
R
updated 2.7 years ago by
Basti
★ 2.1k • written 2.7 years ago by
Nai
▴ 50
0
votes
2
replies
1.0k
views
Design matrix in limma
Limma
R
2.7 years ago by
Nai
▴ 50
0
votes
6
replies
1.9k
views
Differentially gene expression analysis
Limma
Deseq
R
updated 2.8 years ago by
Victor J. Fernández
▴ 40 • written 2.8 years ago by
Nai
▴ 50
0
votes
0
replies
1.6k
views
Add column in Obs. in anndata using scanpy
scanpy
2.8 years ago by
Nai
▴ 50
9
votes
4
replies
2.2k
views
Easiest way to design Bioinformatics pipeline
snakeflow
python
Nextflow
updated 2.9 years ago by
ATpoint
90k • written 2.9 years ago by
Nai
▴ 50
0
votes
4
replies
1.4k
views
Association of allele in population
Plink
2.9 years ago by
Nai
▴ 50
2
votes
4
replies
2.5k
views
VEP annotated vcf is not readable in bcftools
bcftools
Plink
updated 2.4 years ago by
Ram
45k • written 2.9 years ago by
Nai
▴ 50
1
vote
9
replies
4.0k
views
VEP annotated VCF conversion into TSV/Text
R
bcftools
VEP
VCF
updated 2.9 years ago by
yussab
▴ 100 • written 3.0 years ago by
Nai
▴ 50
1
vote
2
replies
1.4k
views
VEP generated VCF file filtering using gnamAD, CADD , dbNSF etc with out loosing sample specific variants.
bcftools
vep
R
VCF
updated 2.7 years ago by
Ram
45k • written 3.0 years ago by
Nai
▴ 50
2
votes
6
replies
4.0k
views
GeoMX NGS RNASeq data analysis
NGS
RNA-Seq
GeoMX
updated 3.0 years ago by
Ram
45k • written 3.1 years ago by
Nai
▴ 50
0
votes
3
replies
1.7k
views
Hardy-Weinberg equilibrium analysis in Plink for association study.
Plink
association
study
updated 3.3 years ago by
Pedro
• 0 • written 3.4 years ago by
Nai
▴ 50
0
votes
1
reply
883
views
SPSS : Descriptive analysis cross tabs error
crosstabs
SPSS
descriptive
analysis
updated 3.3 years ago by
Mensur Dlakic
★ 30k • written 3.3 years ago by
Nai
▴ 50
0
votes
0
replies
659
views
SPSS statistics Analysis
quantitative
SPSS
variable
Marker
analysis
Genotype
Clinical
3.3 years ago by
Nai
▴ 50
2
votes
4
replies
1.5k
views
PLINK CASE-CONTROL ANALYSIS
PLINK
3.4 years ago by
Nai
▴ 50
4
votes
5
replies
5.7k
views
Pandas issue: To write multiple csv in loop
Pandas
Python
R
3.4 years ago by
Nai
▴ 50
0
votes
0
replies
598
views
Expression and splicing QTL
eqtl
MATRIXEQTL
updated 2.7 years ago by
Ram
45k • written 3.6 years ago by
Nai
▴ 50
0
votes
0
replies
559
views
miRNA prediction using mRNA bam files
miRNA
BAM
updated 2.6 years ago by
Ram
45k • written 3.7 years ago by
Nai
▴ 50
0
votes
0
replies
781
views
EQTL visualization
list
EQTL
plot
3.7 years ago by
Nai
▴ 50
0
votes
0
replies
629
views
criteria for pvOutputThreshold = 1e-100 in EQTLMATRIX and creation of geneloc.txt for ciseQTL
eQTL
updated 2.4 years ago by
Ram
45k • written 3.8 years ago by
Nai
▴ 50
1
vote
4
replies
2.5k
views
Bacterial genoem annotation online tools
Bacterial
genome
3.8 years ago by
Nai
▴ 50
0
votes
1
reply
928
views
Assign RSID to ID . / blank column in vcf file
ID
VCF
updated 2.6 years ago by
Ram
45k • written 3.8 years ago by
Nai
▴ 50
0
votes
0
replies
560
views
MATRIXEQTL: Error during load SNPMATRIX.txt in MATRIXEQTL
data
MATRIXEQTL
dims
SNPMATRIX.txt
updated 3.8 years ago by
GenoMax
154k • written 3.8 years ago by
Nai
▴ 50
1
vote
4
replies
1.5k
views
Help needed
bioalcidae
updated 2.7 years ago by
Ram
45k • written 3.8 years ago by
Nai
▴ 50
0
votes
7
replies
2.1k
views
SNPid or chromosomal number and position in vcf
VCF
SNP
3.8 years ago by
Nai
▴ 50
0
votes
13
replies
4.1k
views
eQTL Analysis
and
expression
genotypic
gene
data
SNP
3.8 years ago by
Nai
▴ 50
0
votes
0
replies
667
views
EQTL MATRIX _EQTL
GE
SNP
EQTL
updated 2.7 years ago by
Ram
45k • written 3.8 years ago by
Nai
▴ 50
2
votes
4
replies
1.4k
views
Learning how to create a pipeline in python
snakemake
Python
updated 4.0 years ago by
Wayne
★ 2.1k • written 4.0 years ago by
Nai
▴ 50
0
votes
2
replies
1.2k
views
Heatmap for large significant data
pvalue
data
Heatmap
large
4.0 years ago by
Nai
▴ 50
0
votes
2
replies
1.1k
views
vcf file indiviual column interpretation
vcf
rsid
updated 2.6 years ago by
Ram
45k • written 4.1 years ago by
Nai
▴ 50
0
votes
0
replies
715
views
Fetch rsid and related genotype/sample from vcf file
vcf
rsid
updated 2.6 years ago by
Ram
45k • written 4.1 years ago by
Nai
▴ 50
0
votes
1
reply
1.1k
views
eQTL Analysis
prediction
eQTL
or
identification
analysis
updated 4.1 years ago by
i.sudbery
22k • written 4.1 years ago by
Nai
▴ 50
0
votes
0
replies
851
views
TPM/FPKM value from HTSeq count
value
FPKM
TPM
4.1 years ago by
Nai
▴ 50
0
votes
4
replies
2.1k
views
VCF file
and
VCF
haploview
4.1 years ago by
Nai
▴ 50
0
votes
3
replies
2.1k
views
Removal of multiple samples from vcf file
VCFtools
4.1 years ago by
Nai
▴ 50
0
votes
13
replies
4.6k
views
Haploview and plink
Plink
Haploview
and
4.1 years ago by
Nai
▴ 50
0
votes
10
replies
3.0k
views
TPM value from DESE2 and significant filterig isssue
DESE2
TPM
value
from
4.1 years ago by
Nai
▴ 50
1
vote
11
replies
3.6k
views
desEQ2 eRROR
featurecount
NA
DESeq2
values
4.1 years ago by
Nai
▴ 50
0
votes
3
replies
1.5k
views
HTseq header
count
Htseq
matrix
updated 4.2 years ago by
cpad0112
21k • written 4.2 years ago by
Nai
▴ 50
0
votes
1
reply
1.0k
views
EQTL analysis
sQTL
eQTL
and
updated 4.2 years ago by
Carambakaracho
★ 3.3k • written 4.2 years ago by
Nai
▴ 50
3
votes
18
replies
5.1k
views
Help creating Deseq2 count matrix from separate files
or
Sample
matrix
updated 4.3 years ago by
Ram
45k • written 4.4 years ago by
Nai
▴ 50
2
votes
3
replies
6.1k
views
R ---issues. on server. BiocManager", "genefilter"
BiocManager
genefilter
updated 4.4 years ago by
Sam
★ 4.8k • written 4.4 years ago by
Nai
▴ 50
52 results • Page
1 of 2
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6