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17
votes
8
replies
8.9k
views
6 follow
Differential Peaks Between Replicates
chip-seq
updated 6.0 years ago by 20 • written 11.1 years ago by ★ 2.8k
23
votes
10
replies
9.4k
views
Peaks And Nearby Genes
chip-seq
updated 6.9 years ago by ▴ 120 • written 12.9 years ago by ★ 2.8k
2
votes
1
reply
3.4k
views
Answer: A: Seeking private tutor to learn RNA/ChIP-Seq data analysis
7.0 years ago by Dataminer ★ 2.8k
0
votes
1
reply
6.7k
views
Comment: C: Heatmap In R-Wgcna-->Error While Plotting Tom
7.5 years ago by Dataminer ★ 2.8k
0
votes
1
reply
6.7k
views
Comment: C: Heatmap In R-Wgcna-->Error While Plotting Tom
7.5 years ago by Dataminer ★ 2.8k
0
votes
0
replies
6.7k
views
Comment: C: Heatmap In R-Wgcna-->Error While Plotting Tom
7.5 years ago by Dataminer ★ 2.8k
1
vote
0
replies
6.7k
views
Comment: C: Heatmap In R-Wgcna-->Error While Plotting Tom
7.6 years ago by Dataminer ★ 2.8k
6
votes
4
replies
3.8k
views
From In Silico Identification Of Deleterious Snps To In Vitro Validation Of Same
snp pubmed
updated 7.9 years ago by 20 • written 12.4 years ago by ★ 2.8k
25
votes
14
replies
14k
views
8 follow
Database Of Drugs Targeting Genes
genomics drug
updated 7.9 years ago by ★ 5.2k • written 12.1 years ago by ★ 2.8k
2
votes
1
reply
2.9k
views
Signature genes from RNA-seq time series (Developmental)
RNA-seq edgeR DEseq
7.9 years ago by Dataminer ★ 2.8k
28
votes
7
replies
27k
views
7 follow
Extracting List Of Genes Associated With A Pathway In Kegg
pathway
updated 16 months ago by 43k • written 11.0 years ago by ★ 2.8k
12
votes
4
replies
2.7k
views
Categorising A List Of Refseq Id With Prefix Nr_ Into Mirna, Sn0Rna, And Trna
annotation genomics
updated 10 months ago by 43k • written 11.7 years ago by ★ 2.8k
48
votes
14
replies
26k
views
8 follow
Gene Network Construction... Web Based Tool
gene-network
updated 10 months ago by 43k • written 12.9 years ago by ★ 2.8k
0
votes
1
reply
4.4k
views
Comment: Comment: Heatmap to identify differential regions between 2 groups
updated 2.2 years ago by 43k • written 8.3 years ago by ★ 2.8k
6
votes
3
replies
8.0k
views
To extract row names of plotted heatmap
R heatmap
updated 8.3 years ago by 7.5k • written 8.3 years ago by ★ 2.8k
3
votes
1
reply
2.3k
views
GWAS regions in CANCER
SNP GWAS
updated 2.2 years ago by 43k • written 9.4 years ago by ★ 2.8k
13
votes
11
replies
5.6k
views
6 follow
Clustering ... Any Web Based Tools
clustering
updated 8.5 years ago by 20 • written 12.9 years ago by ★ 2.8k
3
votes
1
reply
2.0k
views
Must have packages on the Rstudio while doing NGS (ChIP/RNA/DNAme) related analysis
DNAme RNA-Seq R Downstream ChIP-Seq
updated 20 months ago by 43k • written 8.5 years ago by ★ 2.8k
2
votes
6
replies
12k
views
Annotatepeaks Function From Homer
genomics
updated 8.6 years ago by • 0 • written 11.7 years ago by ★ 2.8k
8
votes
6
replies
3.4k
views
Biological Pathways And Drug Designing
pathway drug
updated 17 months ago by 43k • written 13.1 years ago by ★ 2.8k
18
votes
7
replies
5.3k
views
6 follow
How About Starting A Tutorial For Chip Seq Data Analysis?
chip-seq next-gen sequencing
updated 22 months ago by 43k • written 12.9 years ago by ★ 2.8k
7
votes
5
replies
3.1k
views
Tools to identify biologically relevant SNP calls from a vcf file
SNP
updated 10 months ago by 43k • written 9.5 years ago by ★ 2.8k
2
votes
5
replies
2.6k
views
Can these fusion predictions by tophat be trusted
Tophat
updated 2.1 years ago by 43k • written 9.5 years ago by ★ 2.8k
1
vote
4
replies
2.7k
views
How different the different ChIP-seq samples are ....
ChIP-Seq
updated 2.6 years ago by 43k • written 9.9 years ago by ★ 2.8k
4
votes
3
replies
3.2k
views
Is There A Way To Get The Single Best Model From A Group Of Models/States Generated By Chromhmm?
chip-seq
updated 2.2 years ago by 43k • written 11.0 years ago by ★ 2.8k
0
votes
1
reply
3.7k
views
Comment: Comment: Confusion with High Confidence SNP Calls (Overlap B/w RNA-seq & WGBS calls) and
updated 2.2 years ago by 43k • written 9.5 years ago by ★ 2.8k
1
vote
0
replies
3.7k
views
Comment: Comment: Confusion with High Confidence SNP Calls (Overlap B/w RNA-seq & WGBS calls) and
updated 2.2 years ago by 43k • written 9.5 years ago by ★ 2.8k
8
votes
5
replies
3.7k
views
Confusion with High Confidence SNP Calls (Overlap B/w RNA-seq & WGBS calls) and Genome Assemblies Used for Alignment and Annotation
SNP WGBS SNPEff RNA-Seq
updated 2.2 years ago by 43k • written 9.5 years ago by ★ 2.8k
14
votes
10
replies
5.5k
views
Reordering the bam file
ChIP-Seq Samtools Bamtools
updated 2.3 years ago by 43k • written 9.6 years ago by ★ 2.8k
3
votes
2
replies
2.1k
views
How to check if my SNPs are also present in 1000 genome project
1000genomes SNP
updated 2.3 years ago by 43k • written 9.6 years ago by ★ 2.8k
3
votes
5
replies
2.7k
views
Identifying Motifs In A Geneset
transcription data analysis
updated 9.7 years ago by 20 • written 12.2 years ago by ★ 2.8k
4
votes
1
reply
2.6k
views
Converting Ensemble Gene IDs from mmseq output file
ID-Conversion mmseq BioMart
updated 2.4 years ago by 43k • written 9.7 years ago by ★ 2.8k
4
votes
2
replies
3.9k
views
Co-occurring TF motifs in peak file from ChIP-seq experiment
ChIP-Seq Motifs
updated 2.4 years ago by 43k • written 9.7 years ago by ★ 2.8k
4
votes
2
replies
4.4k
views
Vcf File From Mpileup ... What Next
variant-calling samtools snps
updated 9.7 years ago by 20 • written 10.2 years ago by ★ 2.8k
9
votes
5
replies
4.0k
views
Differentially expressed genes from RPKM
RNA-Seq
updated 2.4 years ago by 43k • written 9.8 years ago by ★ 2.8k
4
votes
0
replies
4.0k
views
Answer: A: Differentially expressed genes from RPKM
9.8 years ago by Dataminer ★ 2.8k
0
votes
1
reply
4.0k
views
Comment: Comment: Differentially expressed genes from RPKM
updated 2.4 years ago by 43k • written 9.8 years ago by ★ 2.8k
5
votes
2
replies
3.9k
views
Identification of functionally relevant regions from ChIP-seq experiments
RNA-seq TFBS ChIP-seq
updated 2.5 years ago by 43k • written 9.8 years ago by ★ 2.8k
0
votes
0
replies
2.3k
views
Mutation detection/calling from RNA-seq data
RNA-Seq Mutation-call
updated 2.5 years ago by 43k • written 9.9 years ago by ★ 2.8k
5
votes
8
replies
2.8k
views
Snps In Protein Domains
snp genomics
updated 10.1 years ago by ★ 1.9k • written 10.1 years ago by ★ 2.8k
0
votes
1
reply
2.8k
views
Comment: C: Snps In Protein Domains
10.1 years ago by Dataminer ★ 2.8k
0
votes
1
reply
13k
views
Comment: C: Mpileup With A Region File
10.2 years ago by Dataminer ★ 2.8k
11
votes
3
replies
13k
views
Mpileup With A Region File
samtools variant chip-seq mpileup
updated 10.2 years ago by 104k • written 10.2 years ago by ★ 2.8k
3
votes
6
replies
5.6k
views
Interpreting Results From Mpileup
samtools variant-calling
updated 10.3 years ago by ★ 1.3k • written 10.3 years ago by ★ 2.8k
0
votes
1
reply
5.6k
views
Comment: C: Interpreting Results From Mpileup
10.3 years ago by Dataminer ★ 2.8k
21
votes
12
replies
9.6k
views
8 follow
Chip Seq Data Analysis
chip-seq galaxy
updated 10.3 years ago by ▴ 540 • written 13.1 years ago by ★ 2.8k
2
votes
4
replies
4.4k
views
Genomic Distribution Of Peaks
chip-seq data analysis
updated 10.4 years ago by 20 • written 12.9 years ago by ★ 2.8k
16
votes
3
replies
3.7k
views
Computing Number Of Nucleotide And Genes On Each Chromosome
chip-seq ucsc mysql
updated 10.5 years ago by 20 • written 11.0 years ago by ★ 2.8k
40
votes
21
replies
11k
views
12 follow
Nobel Prize And Bioinformatics
updated 10.6 years ago by 49k • written 13.1 years ago by ★ 2.8k
1
vote
0
replies
1.8k
views
Crm Cis Regulatory Modules
functional genomics
updated 10.6 years ago by 20 • written 12.9 years ago by ★ 2.8k
318 results • Page 2 of 7
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