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15
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23
replies
12k
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Where can I get ?or how can I make a mappability track for hg38 assembly
sequencing alignment Assembly sequence
3.0 years ago by manojkumar_bhosale ▴ 70
0
votes
2
replies
1.3k
views
Can FASTQ header tags be added to SAM file output from bowtie2 ?
bwa bowtie alignment sequencing next-gen
4.9 years ago by manojkumar_bhosale ▴ 70
9
votes
5
replies
3.4k
views
Which aligners are commonly used for DNA-seq data alignment?
dna-seq sequencing alignment
4.9 years ago by manojkumar_bhosale ▴ 70
3
votes
2
replies
6.1k
views
What is the difference between VCF specifications 4.1 and 4.2?
VCF next-gen sequencing
updated 6.6 years ago by 20 • written 6.8 years ago by ▴ 70
3
votes
2
replies
2.2k
views
What is the algorithm used by UCSC lift over tool?
sequencing alignment Assembly
6.8 years ago by manojkumar_bhosale ▴ 70
2
votes
3
replies
5.6k
views
I want to convert IGVs TDF file to a readable (.txt) format. Is there any tool/ library available for it?
next-gen IGV alignment BAM
updated 8.5 years ago by 14k • written 8.5 years ago by ▴ 70
1
vote
4
replies
3.9k
views
BWA MEM alignment output of splited fastq files differ from the original(unsplit) fastq file
next-gen alignment
updated 20 months ago by 44k • written 9.3 years ago by ▴ 70
0
votes
6
replies
4.7k
views
Error while running Varscan copynumber command
sequencing alignment software-error
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 70
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