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327
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Answer:
Answer: Which Tool and Database for metagenomic classification at Species level with 16S
4 days ago by
michael.ante
★ 3.9k
0
votes
0
replies
514
views
Answer:
Answer: Can different genes encode the same proteins?
7 weeks ago by
michael.ante
★ 3.9k
0
votes
1
reply
840
views
Answer:
Answer: Transcript coverage 3' bias. Is it really that determining?
8 weeks ago by
michael.ante
★ 3.9k
1
vote
1
reply
487
views
Answer:
Answer: Wilcox or T-test with percentages in R
12 weeks ago by
michael.ante
★ 3.9k
1
vote
1
reply
878
views
Answer:
Answer: Create a fasta and gtf file
3 months ago by
michael.ante
★ 3.9k
1
vote
0
replies
458
views
Answer:
Answer: Getting cds files from ncbi using accession numbers
3 months ago by
michael.ante
★ 3.9k
1
vote
0
replies
428
views
Answer:
Answer: DeNovo Assembly - Assigning gene description
3 months ago by
michael.ante
★ 3.9k
0
votes
0
replies
516
views
Answer:
Answer: How can I convert a .sqn file to .gbk
5 months ago by
michael.ante
★ 3.9k
0
votes
0
replies
558
views
Answer:
Answer: Unable to remove duplicate sequences
5 months ago by
michael.ante
★ 3.9k
1
vote
1
reply
694
views
Answer:
Answer: can someone please explain the DAPARS output?
5 months ago by
michael.ante
★ 3.9k
1
vote
0
replies
3.8k
views
Answer:
Answer: Which alignment for whole bacterial genomes for phylogenetic tree?
16 months ago by
michael.ante
★ 3.9k
0
votes
1
reply
3.0k
views
Answer:
A: How to interpret the differences of read counts using htseq and feature counts?
5.1 years ago by
michael.ante
★ 3.9k
0
votes
1
reply
1.9k
views
Answer:
A: Error in piRNA gtf file while featurecounts step in STAR aligner?
5.2 years ago by
michael.ante
★ 3.9k
2
votes
1
reply
1.2k
views
Answer:
C: Scaleable trimming of GenBank sequences?
5.2 years ago by
michael.ante
★ 3.9k
0
votes
0
replies
1.7k
views
Answer:
A: Transcription factor target gene
5.2 years ago by
michael.ante
★ 3.9k
1
vote
1
reply
3.1k
views
Answer:
A: two questions in loading data
updated 5.2 years ago by
Ram
44k • written 9.2 years ago by
michael.ante
★ 3.9k
0
votes
1
reply
2.5k
views
Answer:
A: Tophat, low alignement left read
updated 5.2 years ago by
Ram
44k • written 9.3 years ago by
michael.ante
★ 3.9k
2
votes
1
reply
2.2k
views
Answer:
A: Joining two files with multiple columns
updated 5.2 years ago by
Ram
44k • written 9.3 years ago by
michael.ante
★ 3.9k
9
votes
1
reply
3.2k
views
Answer:
A: Can FPKM be added?
updated 5.2 years ago by
Ram
44k • written 9.3 years ago by
michael.ante
★ 3.9k
3
votes
1
reply
2.5k
views
Answer:
C: awk, copy and paste single line command
updated 5.2 years ago by
Kevin Blighe
89k • written 5.3 years ago by
michael.ante
★ 3.9k
3
votes
1
reply
3.2k
views
Answer:
A: error in getting sorted bam
updated 5.3 years ago by
Ram
44k • written 9.5 years ago by
michael.ante
★ 3.9k
14
votes
5
replies
35k
views
Answer:
A: Converstion of BED with scores into bigWig
updated 5.3 years ago by
Ram
44k • written 9.6 years ago by
michael.ante
★ 3.9k
1
vote
1
reply
1.5k
views
Answer:
A: Interpret genome alignment results
5.3 years ago by
michael.ante
★ 3.9k
0
votes
0
replies
4.9k
views
Answer:
A: is 0-based start and 1-based end of bed format not compatible with htseq-count?
5.4 years ago by
michael.ante
★ 3.9k
0
votes
0
replies
3.3k
views
Answer:
A: sequence length distribution
5.4 years ago by
michael.ante
★ 3.9k
0
votes
0
replies
1.1k
views
Answer:
A: Bed file of union of all transcripts for a set of genes
5.4 years ago by
michael.ante
★ 3.9k
1
vote
0
replies
2.2k
views
Answer:
A: How to count total small RNAs (known and novel) in my aligned reads?
5.4 years ago by
michael.ante
★ 3.9k
3
votes
1
reply
1.5k
views
Answer:
A: BAM File size increased after extracting unique reads
5.5 years ago by
michael.ante
★ 3.9k
0
votes
0
replies
1.3k
views
Answer:
A: hisat2-build half done
5.7 years ago by
michael.ante
★ 3.9k
0
votes
2
replies
2.8k
views
Answer:
A: mash configure error --with-gsl can not find gsl
updated 5.8 years ago by
GenoMax
149k • written 5.8 years ago by
michael.ante
★ 3.9k
1
vote
1
reply
2.6k
views
Answer:
A: should non-protein-coding rna(e.g. lncRNA) be removed in RNA-Seq differential ex
5.9 years ago by
michael.ante
★ 3.9k
3
votes
1
reply
1.3k
views
Answer:
C: Inconsistent number Pandaseq vs grep
5.9 years ago by
michael.ante
★ 3.9k
2
votes
0
replies
2.2k
views
Answer:
A: Htseq-count result assistance
5.9 years ago by
michael.ante
★ 3.9k
0
votes
1
reply
5.5k
views
Answer:
C: STAR fusion error
5.9 years ago by
michael.ante
★ 3.9k
1
vote
0
replies
1.4k
views
Answer:
A: STAR and HTSeq command line parameters for 3' mRNA-Seq data
5.9 years ago by
michael.ante
★ 3.9k
6
votes
0
replies
7.6k
views
Answer:
C: How do I know if I have DNA contamination in RNA-seq data?
6.0 years ago by
michael.ante
★ 3.9k
2
votes
2
replies
2.4k
views
Answer:
A: HTseq code error repeatedly
6.0 years ago by
michael.ante
★ 3.9k
0
votes
1
reply
1.6k
views
Answer:
A: count file zero
6.0 years ago by
michael.ante
★ 3.9k
1
vote
1
reply
894
views
Answer:
A: Finding smallest sequence which distinguish any DNA sample
6.0 years ago by
michael.ante
★ 3.9k
2
votes
0
replies
12k
views
Answer:
A: The Longest Chromosome > Sizeof(Int32)
6.0 years ago by
michael.ante
★ 3.9k
0
votes
1
reply
2.7k
views
Answer:
A: RNA-seq alignment against globin genes (HBA1, HBA1, and HBB)
6.0 years ago by
michael.ante
★ 3.9k
0
votes
1
reply
5.5k
views
Answer:
A: Overrepresented stretches of Gs in NovaSeq library
6.1 years ago by
michael.ante
★ 3.9k
1
vote
0
replies
3.5k
views
Answer:
A: Infer experiment - Failed to determine strandin paired end stranded RNA-seq
6.2 years ago by
michael.ante
★ 3.9k
2
votes
1
reply
1.4k
views
Answer:
C: To find the genes encoding for Transcription factor in a given list
6.2 years ago by
michael.ante
★ 3.9k
1
vote
1
reply
3.5k
views
Answer:
C: umi_tools extract error: IndexError: string index out of range
6.2 years ago by
michael.ante
★ 3.9k
2
votes
2
replies
5.3k
views
Answer:
A: estimating read length and SD for Kallisto (single-end QuantSeq reads)
6.2 years ago by
michael.ante
★ 3.9k
0
votes
0
replies
2.2k
views
Answer:
A: How to generate custom fasta and gtf files for RNA spike-ins
6.2 years ago by
michael.ante
★ 3.9k
1
vote
1
reply
4.0k
views
Answer:
A: how to extract counts from bam/merge-bam without gtf
6.3 years ago by
michael.ante
★ 3.9k
2
votes
0
replies
1.6k
views
Answer:
A: Extract sequence ID from Fasta for a given sequence
6.3 years ago by
michael.ante
★ 3.9k
0
votes
0
replies
3.3k
views
Answer:
A: Aligning reads to genome together with transcriptome
updated 6.4 years ago by
Ram
44k • written 9.0 years ago by
michael.ante
★ 3.9k
173 results • Page
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