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Comment: Comment: How well was the rRNA depletion for RNA-Seq experiments
16 days ago by michael.ante ★ 3.9k
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359
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Comment: Comment: Genome 2 GEnome Alignment and Unmapped contigs extraction
20 days ago by michael.ante ★ 3.9k
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1
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359
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Comment: Comment: Genome 2 GEnome Alignment and Unmapped contigs extraction
20 days ago by michael.ante ★ 3.9k
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223
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Comment: Comment: Transcriptome Reconstruction for Transcript Discovery
26 days ago by michael.ante ★ 3.9k
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1
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791
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Comment: Comment: How modified GTF file into a BED file with chromosome aware format?
8 weeks ago by michael.ante ★ 3.9k
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304
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Comment: Comment: Annotating bacterial intergenic regions
9 weeks ago by michael.ante ★ 3.9k
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1
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869
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Comment: Comment: Transcript coverage 3' bias. Is it really that determining?
9 weeks ago by michael.ante ★ 3.9k
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869
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Comment: Comment: Transcript coverage 3' bias. Is it really that determining?
9 weeks ago by michael.ante ★ 3.9k
1
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1
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495
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Comment: Comment: Wilcox or T-test with percentages in R
3 months ago by michael.ante ★ 3.9k
2
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1
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496
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Comment: Comment: gtf files for various organism in ucsc
4 months ago by michael.ante ★ 3.9k
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1
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496
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Comment: Comment: gtf files for various organism in ucsc
4 months ago by michael.ante ★ 3.9k
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442
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Comment: Comment: Error with filterbytile.sh from BBMap suite
4 months ago by michael.ante ★ 3.9k
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714
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Comment: Comment: can someone please explain the DAPARS output?
5 months ago by michael.ante ★ 3.9k
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1.0k
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Comment: Comment: Fragmented BUSCOs of genome assemblies - How to improve scores?
5 months ago by michael.ante ★ 3.9k
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0
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571
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Comment: Comment: Unable to remove duplicate sequences
5 months ago by michael.ante ★ 3.9k
1
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652
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Comment: Comment: Affymetrix microarray
6 months ago by michael.ante ★ 3.9k
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0
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939
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Comment: Comment: using parallel on samtools view
6 months ago by michael.ante ★ 3.9k
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1
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939
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Comment: Comment: using parallel on samtools view
6 months ago by michael.ante ★ 3.9k
1
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1
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939
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Comment: Comment: using parallel on samtools view
6 months ago by michael.ante ★ 3.9k
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0
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896
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Comment: Comment: HTseq no features
23 months ago by michael.ante ★ 3.9k
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1.4k
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Comment: Comment: RNA seq for different tissues samples
2.2 years ago by michael.ante ★ 3.9k
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1
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1.2k
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Comment: Comment: finding overlapping motifs to increase length of motif
2.3 years ago by michael.ante ★ 3.9k
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0
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589
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Comment: Comment: Quantify gene expression using flanking sequences
2.4 years ago by michael.ante ★ 3.9k
1
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0
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2.5k
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Comment: Comment: Searching for mRNA ending with a specific 3' pattern in NON-poly-A RNASeq data.
3.4 years ago by michael.ante ★ 3.9k
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1
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2.7k
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Comment: C: How to extract sequences from multiple fastq files based on part of the header?
3.9 years ago by michael.ante ★ 3.9k
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1.0k
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Comment: C: How to interpret one region of gene with much higher RNASeq coverage than other
3.9 years ago by michael.ante ★ 3.9k
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1.9k
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Comment: C: How to identify 3'UTR region?
5.0 years ago by michael.ante ★ 3.9k
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0
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2.0k
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Comment: C: featureCounts log: "WARNING contig is not found in the provided genome file!"
5.0 years ago by michael.ante ★ 3.9k
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0
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1.4k
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Comment: C: Would curated pathway gene set better being weighted than being binary
5.1 years ago by michael.ante ★ 3.9k
0
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1
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1.4k
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Comment: C: Would curated pathway gene set better being weighted than being binary
5.1 years ago by michael.ante ★ 3.9k
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0
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2.2k
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Comment: C: Extract sequences from fastA files based on csv chart in R
5.2 years ago by michael.ante ★ 3.9k
0
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1
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2.2k
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Comment: C: Extract sequences from fastA files based on csv chart
5.2 years ago by michael.ante ★ 3.9k
0
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0
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1.9k
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Comment: C: Error in piRNA gtf file while featurecounts step in STAR aligner?
5.2 years ago by michael.ante ★ 3.9k
0
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1
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1.9k
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Comment: C: STAR error (segmentation fault) in Aligning reads
5.2 years ago by michael.ante ★ 3.9k
0
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2
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2.9k
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Comment: C: FASTQ exctract ID's
5.2 years ago by michael.ante ★ 3.9k
1
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1
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1.9k
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Comment: C: STAR error (segmentation fault) in Aligning reads
5.2 years ago by michael.ante ★ 3.9k
0
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0
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1.1k
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Comment: C: Data set containing corresponding RNA-seq and RT-Qpcr data
5.2 years ago by michael.ante ★ 3.9k
0
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1
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3.2k
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Comment: C: bash loop to count variants using vcftools
updated 5.2 years ago by 44k • written 9.2 years ago by ★ 3.9k
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0
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2.3k
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Comment: C: RNA-SeQC v1.1.8 transcript_id attribute was not found
5.2 years ago by michael.ante ★ 3.9k
1
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0
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7.0k
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Comment: C: How to confirm forward primer matches each read without removing primer sequence
updated 5.2 years ago by 44k • written 9.3 years ago by ★ 3.9k
2
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1
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33k
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Comment: C: getting intersect between two lists of genes in R
updated 5.2 years ago by 44k • written 9.3 years ago by ★ 3.9k
1
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1
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33k
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Comment: C: getting intersect between two lists of genes in R
updated 5.2 years ago by 44k • written 9.3 years ago by ★ 3.9k
1
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1
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33k
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Comment: C: getting intersect between two lists of genes in R
updated 5.2 years ago by 44k • written 9.3 years ago by ★ 3.9k
0
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1
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4.6k
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Comment: C: Annotating RNA-Seq exon junctions
updated 5.2 years ago by 44k • written 9.3 years ago by ★ 3.9k
3
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1
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4.8k
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Comment: C: Merge 2 files based on rs number but keep all info only from the first file
updated 5.2 years ago by 44k • written 9.3 years ago by ★ 3.9k
0
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0
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2.8k
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Comment: C: Nothing will align with HTSeq?
updated 5.3 years ago by 44k • written 9.4 years ago by ★ 3.9k
2
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1
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8.0k
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Comment: C: Using featureCount with a GFF file
5.3 years ago by michael.ante ★ 3.9k
1
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1
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8.0k
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Comment: C: Using featureCount with a GFF file
5.3 years ago by michael.ante ★ 3.9k
0
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1
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7.7k
views
Comment: C: Removing barcode and adapters?
updated 5.3 years ago by 44k • written 9.6 years ago by ★ 3.9k
0
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0
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9.0k
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Comment: C: Bedtools problem : It looks as though you have less than 3 columns at line: 1.
5.3 years ago by michael.ante ★ 3.9k
268 results • Page 1 of 6
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