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0
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replies
748
views
Comment:
C: Finding smallest sequence which distinguish any DNA sample
5.2 years ago by
michael.ante
★ 3.8k
1
vote
1
reply
748
views
Answer:
A: Finding smallest sequence which distinguish any DNA sample
5.2 years ago by
michael.ante
★ 3.8k
1
vote
0
replies
6.9k
views
Comment:
C: Remove duplicates in an extremely large text file
5.2 years ago by
michael.ante
★ 3.8k
2
votes
0
replies
6.9k
views
Comment:
C: Remove duplicates in an extremely large text file
5.2 years ago by
michael.ante
★ 3.8k
1
vote
0
replies
1.3k
views
Comment:
C: simulate DNA reads with unique molecular identifiers (UMIs)
5.2 years ago by
michael.ante
★ 3.8k
0
votes
1
reply
3.5k
views
Comment:
C: Best practices for counting genes with nanopore RNAseq data
5.2 years ago by
michael.ante
★ 3.8k
2
votes
0
replies
12k
views
Answer:
A: The Longest Chromosome > Sizeof(Int32)
5.2 years ago by
michael.ante
★ 3.8k
0
votes
0
replies
2.1k
views
Comment:
C: RNA-seq alignment against globin genes (HBA1, HBA1, and HBB)
5.2 years ago by
michael.ante
★ 3.8k
0
votes
1
reply
2.1k
views
Answer:
A: RNA-seq alignment against globin genes (HBA1, HBA1, and HBB)
5.2 years ago by
michael.ante
★ 3.8k
0
votes
1
reply
2.1k
views
Comment:
C: RNA-seq alignment against globin genes (HBA1, HBA1, and HBB)
5.2 years ago by
michael.ante
★ 3.8k
0
votes
1
reply
2.1k
views
Comment:
C: RNA-seq alignment against globin genes (HBA1, HBA1, and HBB)
5.2 years ago by
michael.ante
★ 3.8k
1
vote
1
reply
2.4k
views
Comment:
C: Analyzing 3' RNA seq library with DEseq2
5.2 years ago by
michael.ante
★ 3.8k
1
vote
0
replies
1.6k
views
Comment:
C: Annotate unknown reaction from known reactants
5.2 years ago by
michael.ante
★ 3.8k
0
votes
0
replies
4.7k
views
Comment:
C: Overrepresented stretches of Gs in NovaSeq library
5.2 years ago by
michael.ante
★ 3.8k
0
votes
1
reply
4.7k
views
Answer:
A: Overrepresented stretches of Gs in NovaSeq library
5.2 years ago by
michael.ante
★ 3.8k
0
votes
0
replies
3.2k
views
Comment:
C: Fields with biggest demand for bioinformatics?
5.2 years ago by
michael.ante
★ 3.8k
0
votes
1
reply
3.3k
views
Comment:
C: Problem in running STAR
5.3 years ago by
michael.ante
★ 3.8k
1
vote
1
reply
3.3k
views
Comment:
C: Problem in running STAR
5.3 years ago by
michael.ante
★ 3.8k
1
vote
2
replies
3.7k
views
Comment:
C: Finding out assembly reference from bam file
5.3 years ago by
michael.ante
★ 3.8k
3
votes
1
reply
3.7k
views
Comment:
C: Finding out assembly reference from bam file
5.3 years ago by
michael.ante
★ 3.8k
0
votes
0
replies
2.6k
views
Comment:
C: Will the --outfiltermismatchNmax in the STAR works for the single end reads?
5.3 years ago by
michael.ante
★ 3.8k
0
votes
1
reply
3.7k
views
Comment:
C: IGV ignoring indexed and sorted .bai file and trying to create a .fai file to vi
5.3 years ago by
michael.ante
★ 3.8k
1
vote
0
replies
3.0k
views
Answer:
A: Infer experiment - Failed to determine strandin paired end stranded RNA-seq
5.3 years ago by
michael.ante
★ 3.8k
1
vote
0
replies
2.9k
views
Comment:
C: BBDuk.sh and BBDuk2.sh barcodefilter does not filter the reads
5.4 years ago by
michael.ante
★ 3.8k
0
votes
1
reply
3.1k
views
Comment:
C: STAR Splice Junctions normalization
5.4 years ago by
michael.ante
★ 3.8k
0
votes
1
reply
3.1k
views
Comment:
C: STAR Splice Junctions normalization
5.4 years ago by
michael.ante
★ 3.8k
1
vote
1
reply
3.1k
views
Comment:
C: STAR Splice Junctions normalization
5.4 years ago by
michael.ante
★ 3.8k
3
votes
0
replies
2.9k
views
Comment:
A: BBDuk.sh and BBDuk2.sh barcodefilter does not filter the reads
updated 5.4 years ago by
finswimmer
16k • written 5.4 years ago by
michael.ante
★ 3.8k
1
vote
1
reply
3.1k
views
Comment:
C: STAR Splice Junctions normalization
5.4 years ago by
michael.ante
★ 3.8k
0
votes
1
reply
3.1k
views
Comment:
C: STAR Splice Junctions normalization
5.4 years ago by
michael.ante
★ 3.8k
1
vote
0
replies
1.8k
views
Comment:
C: Terrible RNA mapping result by STAR
5.4 years ago by
michael.ante
★ 3.8k
2
votes
1
reply
1.3k
views
Answer:
C: To find the genes encoding for Transcription factor in a given list
5.4 years ago by
michael.ante
★ 3.8k
1
vote
1
reply
3.1k
views
Answer:
C: umi_tools extract error: IndexError: string index out of range
5.4 years ago by
michael.ante
★ 3.8k
0
votes
0
replies
3.4k
views
Comment:
C: samtools: splitting a bam file putting all scaffolds together
5.4 years ago by
michael.ante
★ 3.8k
3
votes
1
reply
5.6k
views
Comment:
C: How to remove singletons in a BAM file using samtools
5.4 years ago by
michael.ante
★ 3.8k
0
votes
0
replies
1.7k
views
Comment:
C: Add taxonomy information of fileA to species list in fileB
5.4 years ago by
michael.ante
★ 3.8k
2
votes
2
replies
4.9k
views
Answer:
A: estimating read length and SD for Kallisto (single-end QuantSeq reads)
5.4 years ago by
michael.ante
★ 3.8k
1
vote
0
replies
6.7k
views
Comment:
C: RNA-seq mapping rate
5.4 years ago by
michael.ante
★ 3.8k
0
votes
0
replies
1.9k
views
Answer:
A: How to generate custom fasta and gtf files for RNA spike-ins
5.4 years ago by
michael.ante
★ 3.8k
1
vote
0
replies
6.5k
views
Comment:
C: Antisense transcription from strand specific RNA-seq
5.4 years ago by
michael.ante
★ 3.8k
1
vote
0
replies
3.4k
views
Comment:
C: how to extract counts from bam/merge-bam without gtf
5.4 years ago by
michael.ante
★ 3.8k
0
votes
0
replies
1.2k
views
Comment:
C: chimeric transcripts detection tool
5.4 years ago by
michael.ante
★ 3.8k
1
vote
1
reply
3.4k
views
Answer:
A: how to extract counts from bam/merge-bam without gtf
5.4 years ago by
michael.ante
★ 3.8k
0
votes
0
replies
5.4k
views
Comment:
C: % of reads unmapped: too short - STAR 2.5.2b
5.5 years ago by
michael.ante
★ 3.8k
0
votes
0
replies
5.2k
views
Comment:
C: cause of unmapped short with STAR
5.5 years ago by
michael.ante
★ 3.8k
0
votes
0
replies
2.2k
views
Comment:
C: The same qvalues are reported to different pvalues
5.5 years ago by
michael.ante
★ 3.8k
0
votes
1
reply
6.0k
views
Comment:
C: Can one use STAR (splice-aware) to align genomic DNA (non-spliced)
5.5 years ago by
michael.ante
★ 3.8k
1
vote
0
replies
1.7k
views
Comment:
C: Faster way to get sequences from large fasta files?
5.5 years ago by
michael.ante
★ 3.8k
0
votes
1
reply
6.0k
views
Comment:
C: Can one use STAR (splice-aware) to align genomic DNA (non-spliced)
5.5 years ago by
michael.ante
★ 3.8k
0
votes
0
replies
5.7k
views
Comment:
C: How can I make a .bed file from my fasta?
5.5 years ago by
michael.ante
★ 3.8k
412 results • Page
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