User: galina_ananina

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Posts by galina_ananina

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Answer: A: miRDeep2.pl error when reads.fa input file contains info for more than one sampl
... If I remember it right, we concatenated all samples to one and ran mapper.pl. Then, we applied mirdeep.pl. using reads.fa and others required files and it did work. ...
written 17 months ago by galina_ananina0
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Comment: C: Standard error of cross-validation estimates in software ADMIXTURE
... Eventually , you can try penalized estimation (manual, page 11) recommended for large K values. ...
written 2.9 years ago by galina_ananina0
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mirdeep2: miRDeep.pl error
... I wonder if somebody knows how many different (not concatenated) samples can be analyzed with miRDeep.pl module of mirdeep2 package. I have some troubles to analyze more than 2 samples. After preparing reads_collapsed.fa (-m option to collapse reads applied) e reads_vs_genome.arf applying config-fil ...
software error next-gen written 3.8 years ago by galina_ananina0

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