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510
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Manta <DUP:TANDEM> interpretation
structural
updated 8 months ago by 166k • written 8 months ago by ▴ 580
0
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0
replies
463
views
How VEP BAM Edit works?
variant VEP
16 months ago by bharata1803 ▴ 580
0
votes
1
reply
762
views
VEP fail to annotate NCBI refseq GFF
VEP variant
19 months ago by bharata1803 ▴ 580
0
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1
reply
2.6k
views
Comment: Comment: HGVS Nomenclature of Multiple Indels found in Cis
20 months ago by bharata1803 ▴ 580
0
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0
replies
2.2k
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Answer: Answer: NGS tertiary analysis
20 months ago by bharata1803 ▴ 580
0
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0
replies
1.7k
views
Comment: Comment: Variant annotation using Illumina Basespace Variant Interpreter
21 months ago by bharata1803 ▴ 580
0
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6
replies
2.8k
views
Samtools variant caller for each individual sample
variant calling SNP samtools sequence
updated 5.1 years ago by 20 • written 8.7 years ago by ▴ 580
0
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1
reply
2.2k
views
Samview from bam file aligned to cDNA reference
RNA-Seq sam bam
updated 5.4 years ago by 20 • written 9.5 years ago by ▴ 580
0
votes
3
replies
2.3k
views
CAGEFightR to get CTSS from CAGE error
cage-seq bioconductor
updated 5.8 years ago by • 0 • written 6.9 years ago by ▴ 580
0
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0
replies
2.8k
views
Comment: C: KEGG pathway gene list different from the picture
updated 5.9 years ago by 45k • written 9.9 years ago by ▴ 580
0
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1
reply
5.0k
views
Comment: C: Microarray and RNA-seq different result
updated 5.9 years ago by 45k • written 9.9 years ago by ▴ 580
0
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1
reply
3.5k
views
Comment: C: Comparison of microarray and RNA-seq data
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 580
0
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0
replies
2.4k
views
Comment: C: find transcription factor
updated 6.0 years ago by 45k • written 10.4 years ago by ▴ 580
4
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5
replies
5.3k
views
Around 3 months short course or summer school in Bioinformatics
courses workshop
written 9.6 years ago by ▴ 580
1
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0
replies
9.1k
views
Comment: C: Salmon tximport get TPM
6.2 years ago by bharata1803 ▴ 580
7
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3
replies
9.1k
views
Salmon tximport get TPM
RNA-Seq Salmon
6.2 years ago by bharata1803 ▴ 580
0
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4
replies
1.5k
views
Finding similarities of 2 independent samples
RNA-Seq
updated 6.2 years ago by 20 • written 6.4 years ago by ▴ 580
0
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1
reply
1.8k
views
Comment: C: Extracting important gene with similar expression level from multiple samples
6.2 years ago by bharata1803 ▴ 580
0
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4
replies
1.8k
views
Extracting important gene with similar expression level from multiple samples
RNA-Seq clustering feature extraction
updated 6.2 years ago by ▴ 710 • written 6.2 years ago by ▴ 580
0
votes
2
replies
3.0k
views
FIMO score calculation
fimo PWM
updated 6.3 years ago by • 0 • written 7.7 years ago by ▴ 580
0
votes
1
reply
1.5k
views
Comment: C: Finding similarities of 2 independent samples
6.3 years ago by bharata1803 ▴ 580
0
votes
0
replies
1.9k
views
Fastq-dump error time exhausted
fastq RNA-Seq ncbi
6.5 years ago by bharata1803 ▴ 580
0
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0
replies
1.0k
views
DE genes effect in regulatory network for time course data
RNA-Seq deseq2 grn
6.5 years ago by bharata1803 ▴ 580
2
votes
0
replies
3.2k
views
Answer: A: DEG from BAM file
6.6 years ago by bharata1803 ▴ 580
0
votes
1
reply
1.6k
views
Differential expression analysis for time course data
RNA-Seq DESeq2
6.6 years ago by bharata1803 ▴ 580
0
votes
2
replies
4.2k
views
Getting raw FASTQ file from GDC/TCGA database
RNA-Seq next-gen
updated 6.7 years ago by 20 • written 6.7 years ago by ▴ 580
0
votes
2
replies
2.0k
views
Subread and featurecounts read index and annotation once for all
RNA-Seq alignment featurecounts
updated 6.7 years ago by 20 • written 6.9 years ago by ▴ 580
0
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0
replies
4.2k
views
Comment: C: Getting raw FASTQ file from GDC/TCGA database
6.7 years ago by bharata1803 ▴ 580
0
votes
0
replies
1.9k
views
FIMO parameter for PWM motif scanning
fimo pwm
6.8 years ago by bharata1803 ▴ 580
0
votes
0
replies
2.0k
views
Comment: C: Subread and featurecounts read index and annotation once for all
6.9 years ago by bharata1803 ▴ 580
0
votes
0
replies
5.3k
views
Comment: C: FASTQ alignment result is really bad
6.9 years ago by bharata1803 ▴ 580
0
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1
reply
5.3k
views
Comment: C: FASTQ alignment result is really bad
6.9 years ago by bharata1803 ▴ 580
0
votes
0
replies
5.3k
views
Comment: C: FASTQ alignment result is really bad
6.9 years ago by bharata1803 ▴ 580
0
votes
1
reply
5.3k
views
Comment: C: FASTQ alignment result is really bad
6.9 years ago by bharata1803 ▴ 580
0
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20
replies
5.3k
views
FASTQ alignment result is really bad
RNA-Seq htseq-count salmon
updated 6.9 years ago by 35k • written 6.9 years ago by ▴ 580
0
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0
replies
5.3k
views
Comment: C: FASTQ alignment result is really bad
6.9 years ago by bharata1803 ▴ 580
0
votes
1
reply
5.3k
views
Comment: C: FASTQ alignment result is really bad
6.9 years ago by bharata1803 ▴ 580
0
votes
0
replies
5.3k
views
Comment: C: FASTQ alignment result is really bad
6.9 years ago by bharata1803 ▴ 580
0
votes
1
reply
5.3k
views
Comment: C: FASTQ alignment result is really bad
6.9 years ago by bharata1803 ▴ 580
0
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0
replies
5.3k
views
Comment: C: FASTQ alignment result is really bad
6.9 years ago by bharata1803 ▴ 580
0
votes
0
replies
5.3k
views
Comment: C: FASTQ alignment result is really bad
6.9 years ago by bharata1803 ▴ 580
0
votes
0
replies
2.5k
views
Answer: A: What is the best way to compare transcriptome between different condition?
6.9 years ago by bharata1803 ▴ 580
0
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0
replies
2.2k
views
FANTOM5 CAGE data to get promoter region
fantom5 cage-seq
6.9 years ago by bharata1803 ▴ 580
1
vote
0
replies
1.6k
views
Answer: A: Integrate several layers of biological information to build a biological network
7.0 years ago by bharata1803 ▴ 580
3
votes
1
reply
1.9k
views
Answer: A: Dataset kind of data NCBI
7.0 years ago by bharata1803 ▴ 580
3
votes
2
replies
4.0k
views
Comment: C: Couldn't able to run the DESeq2
7.0 years ago by bharata1803 ▴ 580
2
votes
2
replies
3.0k
views
Filtering low count when using Tximport from Salmon to DESeq2
deseq2 RNA-Seq
updated 7.0 years ago by 35k • written 7.0 years ago by ▴ 580
0
votes
1
reply
3.5k
views
Comment: C: Transcript differential exprs analysis using Kallisto not significant
7.0 years ago by bharata1803 ▴ 580
5
votes
8
replies
3.5k
views
Transcript differential exprs analysis using Kallisto not significant
RNA-Seq
updated 7.0 years ago by ★ 4.2k • written 7.0 years ago by ▴ 580
0
votes
1
reply
3.5k
views
Comment: C: Transcript differential exprs analysis using Kallisto not significant
7.0 years ago by bharata1803 ▴ 580
245 results • Page 1 of 5
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