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0
votes
6
replies
1.5k
views
Samtools variant caller for each individual sample
variant calling SNP samtools sequence
updated 14 months ago by 20 • written 4.8 years ago by ▴ 530
0
votes
1
reply
1.5k
views
Samview from bam file aligned to cDNA reference
RNA-Seq sam bam
updated 17 months ago by 20 • written 5.6 years ago by ▴ 530
0
votes
3
replies
1.1k
views
CAGEFightR to get CTSS from CAGE error
cage-seq bioconductor
updated 23 months ago by • 0 • written 3.0 years ago by ▴ 530
0
votes
0
replies
1.8k
views
Comment: C: KEGG pathway gene list different from the picture
updated 24 months ago by 35k • written 6.0 years ago by ▴ 530
0
votes
1
reply
2.6k
views
Comment: C: Microarray and RNA-seq different result
updated 24 months ago by 35k • written 6.0 years ago by ▴ 530
0
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1
reply
2.4k
views
Comment: C: Comparison of microarray and RNA-seq data
updated 2.0 years ago by 35k • written 6.1 years ago by ▴ 530
0
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0
replies
1.5k
views
Comment: C: find transcription factor
updated 2.1 years ago by 35k • written 6.5 years ago by ▴ 530
4
votes
5
replies
2.9k
views
Around 3 months short course or summer school in Bioinformatics
courses workshop
written 5.7 years ago by ▴ 530
1
vote
0
replies
4.0k
views
Comment: C: Salmon tximport get TPM
2.3 years ago by bharata1803 ▴ 530
6
votes
3
replies
4.0k
views
Salmon tximport get TPM
RNA-Seq Salmon
2.3 years ago by bharata1803 ▴ 530
0
votes
4
replies
448
views
Finding similarities of 2 independent samples
RNA-Seq
updated 2.3 years ago by 20 • written 2.4 years ago by ▴ 530
0
votes
1
reply
591
views
Comment: C: Extracting important gene with similar expression level from multiple samples
2.3 years ago by bharata1803 ▴ 530
0
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4
replies
591
views
Extracting important gene with similar expression level from multiple samples
RNA-Seq clustering feature extraction
updated 2.3 years ago by ▴ 620 • written 2.3 years ago by ▴ 530
0
votes
2
replies
1.8k
views
FIMO score calculation
fimo PWM
updated 2.4 years ago by • 0 • written 3.8 years ago by ▴ 530
0
votes
1
reply
448
views
Comment: C: Finding similarities of 2 independent samples
2.4 years ago by bharata1803 ▴ 530
0
votes
0
replies
1.1k
views
Fastq-dump error time exhausted
fastq RNA-Seq ncbi
2.5 years ago by bharata1803 ▴ 530
0
votes
0
replies
498
views
DE genes effect in regulatory network for time course data
RNA-Seq deseq2 grn
2.6 years ago by bharata1803 ▴ 530
2
votes
0
replies
1.2k
views
Answer: A: DEG from BAM file
2.7 years ago by bharata1803 ▴ 530
0
votes
1
reply
955
views
Differential expression analysis for time course data
RNA-Seq DESeq2
2.7 years ago by bharata1803 ▴ 530
0
votes
2
replies
2.1k
views
Getting raw FASTQ file from GDC/TCGA database
RNA-Seq next-gen
updated 2.8 years ago by 20 • written 2.8 years ago by ▴ 530
0
votes
2
replies
942
views
Subread and featurecounts read index and annotation once for all
RNA-Seq alignment featurecounts
updated 2.8 years ago by 20 • written 3.0 years ago by ▴ 530
0
votes
0
replies
2.1k
views
Comment: C: Getting raw FASTQ file from GDC/TCGA database
2.8 years ago by bharata1803 ▴ 530
0
votes
0
replies
1.0k
views
FIMO parameter for PWM motif scanning
fimo pwm
2.9 years ago by bharata1803 ▴ 530
0
votes
0
replies
942
views
Comment: C: Subread and featurecounts read index and annotation once for all
3.0 years ago by bharata1803 ▴ 530
0
votes
0
replies
1.6k
views
Comment: C: FASTQ alignment result is really bad
3.0 years ago by bharata1803 ▴ 530
0
votes
1
reply
1.6k
views
Comment: C: FASTQ alignment result is really bad
3.0 years ago by bharata1803 ▴ 530
0
votes
0
replies
1.6k
views
Comment: C: FASTQ alignment result is really bad
3.0 years ago by bharata1803 ▴ 530
0
votes
1
reply
1.6k
views
Comment: C: FASTQ alignment result is really bad
3.0 years ago by bharata1803 ▴ 530
0
votes
20
replies
1.6k
views
FASTQ alignment result is really bad
RNA-Seq htseq-count salmon
updated 3.0 years ago by 33k • written 3.0 years ago by ▴ 530
0
votes
0
replies
1.6k
views
Comment: C: FASTQ alignment result is really bad
3.0 years ago by bharata1803 ▴ 530
0
votes
1
reply
1.6k
views
Comment: C: FASTQ alignment result is really bad
3.0 years ago by bharata1803 ▴ 530
0
votes
0
replies
1.6k
views
Comment: C: FASTQ alignment result is really bad
3.0 years ago by bharata1803 ▴ 530
0
votes
1
reply
1.6k
views
Comment: C: FASTQ alignment result is really bad
3.0 years ago by bharata1803 ▴ 530
0
votes
0
replies
1.6k
views
Comment: C: FASTQ alignment result is really bad
3.0 years ago by bharata1803 ▴ 530
0
votes
0
replies
1.6k
views
Comment: C: FASTQ alignment result is really bad
3.0 years ago by bharata1803 ▴ 530
0
votes
0
replies
1.0k
views
Answer: A: What is the best way to compare transcriptome between different condition?
3.0 years ago by bharata1803 ▴ 530
0
votes
0
replies
1.3k
views
FANTOM5 CAGE data to get promoter region
fantom5 cage-seq
3.0 years ago by bharata1803 ▴ 530
1
vote
0
replies
685
views
Answer: A: Integrate several layers of biological information to build a biological network
3.0 years ago by bharata1803 ▴ 530
3
votes
1
reply
785
views
Answer: A: Dataset kind of data NCBI
3.1 years ago by bharata1803 ▴ 530
3
votes
2
replies
2.1k
views
Comment: C: Couldn't able to run the DESeq2
3.1 years ago by bharata1803 ▴ 530
2
votes
2
replies
1.5k
views
Filtering low count when using Tximport from Salmon to DESeq2
deseq2 RNA-Seq
updated 3.1 years ago by 33k • written 3.1 years ago by ▴ 530
0
votes
1
reply
1.6k
views
Comment: C: Transcript differential exprs analysis using Kallisto not significant
3.1 years ago by bharata1803 ▴ 530
4
votes
8
replies
1.6k
views
Transcript differential exprs analysis using Kallisto not significant
RNA-Seq
updated 3.1 years ago by ★ 3.7k • written 3.1 years ago by ▴ 530
0
votes
1
reply
1.6k
views
Comment: C: Transcript differential exprs analysis using Kallisto not significant
3.1 years ago by bharata1803 ▴ 530
0
votes
0
replies
1.6k
views
Comment: C: Transcript differential exprs analysis using Kallisto not significant
3.1 years ago by bharata1803 ▴ 530
3
votes
0
replies
1.6k
views
Kallisto estimated sd and fragment length
RNA-Seq kallisto alignment
3.1 years ago by bharata1803 ▴ 530
0
votes
0
replies
1.7k
views
Comment: C: Finding miRNA motifs from Exome sequencing
3.1 years ago by bharata1803 ▴ 530
1
vote
1
reply
2.8k
views
Bedtools with name and full header
bed
updated 3.2 years ago by 20 • written 5.8 years ago by ▴ 530
0
votes
1
reply
648
views
Comment: C: Bioinformatics conference with possible publication
3.2 years ago by bharata1803 ▴ 530
0
votes
5
replies
648
views
Bioinformatics conference with possible publication
conference bioinformatics
3.2 years ago by bharata1803 ▴ 530
239 results • Page 1 of 5
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