User: sharma_tina189059

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50
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New User
Location:
United States
Last seen:
2 years, 11 months ago
Joined:
4 years, 4 months ago
Email:
s****************@yahoo.co.in

Posts by sharma_tina189059

<prev • 19 results • page 1 of 2 • next >
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identification of genes from contigs using reference genome
... Hi all, I have 1500 contigs of eukaryotes and a reference draft sequences. I need to find out polyketides genes in my contigs for further analysis. Please suggest me suitable pipeline. ...
gene genome written 3.4 years ago by sharma_tina18905950 • updated 3.3 years ago by Biostar ♦♦ 20
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linux error while functional annotation
... can anyone expalin this error in linux while using AutoFACT for COG assignment..   ------------- EXCEPTION: Bio::Root::Exception ------------- MSG: Could not open <fasta_file: No such file or directory STACK: Error::throw STACK: Bio::Root::Root::throw /usr/local/share/perl5/Bio/Root/Root.pm:486 ...
genome written 3.8 years ago by sharma_tina18905950
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circos diagram error
... can anyone tell me how to make datafiles for circos? i have gene coordinates file using glimmer. how to convert this file to circos format? ...
software error written 3.8 years ago by sharma_tina18905950
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Comment: C: NCBI gene IDs
... yes..u were right..thanku ...
written 3.8 years ago by sharma_tina18905950
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Answer: A: NCBI gene IDs
... i got the answer guys...the same genes were present on chromosome and plasmids that z y ncbi mentioned same gene ids several times ...
written 3.8 years ago by sharma_tina18905950
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NCBI gene IDs
... Hi can anyone tell me why I am getting duplicate gene Ids in NCBI...The same gene Id exist several time..what is the reason behind this? ...
gene sequence written 3.8 years ago by sharma_tina18905950
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Comment: C: SNP analysis of genes
... yes I have a reference seq. and i have got significant hits of query with ref. genome, then what about further analysis? ...
written 3.8 years ago by sharma_tina18905950
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SNP analysis of genes
... Hi Can anyone help in SNP analysis. Which online tool should I use to get the data for SNP. ...
snp written 3.9 years ago by sharma_tina18905950 • updated 21 months ago by nuzhat.bt0
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bioinformatics tool for COG assignment
... Can anyone tell me about AutoFACT tool for COG assignment. I got BLAST Hits and and not able to assign COG families to blast output. Please tell me how to assign COG families.   ...
genome written 3.9 years ago by sharma_tina18905950 • updated 3.8 years ago by Biostar ♦♦ 20
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Glimmer for gene identification
... Hi, can anyone tell me the build ICM in glimmer. I am unable to understand how to prepare the input files and how to run it on linux. ...
gene written 4.0 years ago by sharma_tina18905950 • updated 14 months ago by h.mon25k

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