Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
1
vote
3
replies
2.1k
views
high-throughput domain discovery
domain proteins
updated 6.6 years ago by ▴ 40 • written 7.8 years ago by ▴ 280
0
votes
1
reply
8.5k
views
Comment: C: How do I know if I have DNA contamination in RNA-seq data?
6.7 years ago by blur ▴ 280
1
vote
5
replies
7.6k
views
bad quality in certain tiles according to "Per tile sequence quality" in FASTQC
fastqc Per tile sequence quality
6.7 years ago by blur ▴ 280
0
votes
1
reply
7.6k
views
Comment: C: bad quality in certain tiles according to "Per tile sequence quality" in FASTQC
6.7 years ago by blur ▴ 280
0
votes
1
reply
7.6k
views
Comment: C: bad quality in certain tiles according to "Per tile sequence quality" in FASTQC
6.7 years ago by blur ▴ 280
0
votes
0
replies
2.9k
views
Comment: C: Filtering noise out of SAM file using CIGAR
7.0 years ago by blur ▴ 280
0
votes
1
reply
2.9k
views
Comment: C: Filtering noise out of SAM file using CIGAR
7.0 years ago by blur ▴ 280
0
votes
0
replies
4.7k
views
Comment: C: RNA-seq alignment rate is too low.
7.0 years ago by blur ▴ 280
2
votes
10
replies
2.9k
views
Filtering noise out of SAM file using CIGAR
SAM CIGAR
updated 7.0 years ago by ★ 3.3k • written 7.0 years ago by ▴ 280
0
votes
1
reply
2.9k
views
Comment: C: Filtering noise out of SAM file using CIGAR
7.0 years ago by blur ▴ 280
0
votes
0
replies
1.8k
views
Comment: C: Bulk extraction alias field from GeneCard
7.1 years ago by blur ▴ 280
0
votes
2
replies
1.8k
views
Bulk extraction alias field from GeneCard
genecards
7.1 years ago by blur ▴ 280
2
votes
2
replies
1.4k
views
Order of samtools mpileup - arbitrary or not?
samtools mpileup
updated 7.3 years ago by 105k • written 7.3 years ago by ▴ 280
2
votes
7
replies
2.8k
views
Can you get mpileup to report positions with coverage of 0?
samtools mpileup
updated 7.4 years ago by 105k • written 7.4 years ago by ▴ 280
0
votes
1
reply
2.8k
views
Comment: C: Can you get mpileup to report positions with coverage of 0?
7.4 years ago by blur ▴ 280
0
votes
1
reply
2.8k
views
Comment: C: Can you get mpileup to report positions with coverage of 0?
7.4 years ago by blur ▴ 280
2
votes
4
replies
1.4k
views
Lists of ncRNAS for cow, yeast
ncrna
updated 7.4 years ago by 154k • written 7.4 years ago by ▴ 280
0
votes
1
reply
1.4k
views
Comment: C: Lists of ncRNAS for cow, yeast
7.4 years ago by blur ▴ 280
0
votes
0
replies
1.6k
views
pileup vs. IGV insertion locations
pileup igv
7.6 years ago by blur ▴ 280
0
votes
0
replies
3.3k
views
Comment: C: IGV - is there a way to extract bulk information?
7.7 years ago by blur ▴ 280
5
votes
7
replies
3.3k
views
6 follow
IGV - is there a way to extract bulk information?
igv
updated 7.7 years ago by 22k • written 7.7 years ago by ▴ 280
0
votes
0
replies
3.5k
views
Comment: C: BWA vs. bowtie
7.8 years ago by blur ▴ 280
1
vote
2
replies
3.5k
views
BWA vs. bowtie
bowtie2 BWA NGS
updated 7.9 years ago by 105k • written 7.9 years ago by ▴ 280
0
votes
2
replies
12k
views
Comment: C: Picard tools duplicate removal
8.1 years ago by blur ▴ 280
7
votes
8
replies
12k
views
Picard tools duplicate removal
RNA-Seq picard-tools
8.1 years ago by blur ▴ 280
0
votes
0
replies
1.7k
views
Comment: C: Uploading bed3 format into Guitar package in R
8.1 years ago by blur ▴ 280
0
votes
1
reply
1.7k
views
Uploading bed3 format into Guitar package in R
RNA-Seq R guitar
8.1 years ago by blur ▴ 280
0
votes
7
replies
3.0k
views
Could not find or load main class net.sf.picard.sam.SortSam
ChIP-Seq RNA-Seq
written 8.5 years ago by ▴ 280
0
votes
0
replies
1.2k
views
A DB for rRNA, especially one containing rRNA pseudogenes?
RNA-Seq rRNA
8.3 years ago by blur ▴ 280
0
votes
0
replies
2.4k
views
Comment: C: Database for MOUSE small RNAs?
8.3 years ago by blur ▴ 280
1
vote
3
replies
2.4k
views
Database for MOUSE small RNAs?
RNA-Seq small RNA
updated 8.3 years ago by 154k • written 8.3 years ago by ▴ 280
0
votes
0
replies
4.5k
views
Comment: C: problem with BWA alignment
8.4 years ago by blur ▴ 280
4
votes
6
replies
4.5k
views
problem with BWA alignment
RNA-Seq bwa
updated 8.4 years ago by ▴ 240 • written 8.4 years ago by ▴ 280
3
votes
3
replies
4.8k
views
fastq_quality_trimmer: Premature End-Of-File
fastq_quality_trimmer fastx
updated 8.4 years ago by ★ 2.9k • written 8.4 years ago by ▴ 280
3
votes
2
replies
4.2k
views
trim galore putfiles
trim galore
updated 8.4 years ago by 5.3k • written 9.2 years ago by ▴ 280
1
vote
1
reply
4.2k
views
Comment: C: pileup format: what's the difference between upper and lower case?
8.5 years ago by blur ▴ 280
1
vote
4
replies
4.2k
views
pileup format: what's the difference between upper and lower case?
samtools pileup
updated 8.5 years ago by 105k • written 8.5 years ago by ▴ 280
0
votes
0
replies
3.0k
views
Comment: C: Could not find or load main class net.sf.picard.sam.SortSam
8.5 years ago by blur ▴ 280
0
votes
0
replies
3.0k
views
Comment: C: Could not find or load main class net.sf.picard.sam.SortSam
8.5 years ago by blur ▴ 280
0
votes
0
replies
1.9k
views
Comment: C: actual coverage vs. macs2
8.5 years ago by blur ▴ 280
0
votes
1
reply
1.9k
views
actual coverage vs. macs2
macs2 coverage coveragebed
8.6 years ago by blur ▴ 280
0
votes
0
replies
1.9k
views
Comment: C: FASTQC problem - repetitive k-mer
8.6 years ago by blur ▴ 280
0
votes
3
replies
1.9k
views
FASTQC problem - repetitive k-mer
RNA-Seq fastqc kmer
8.6 years ago by blur ▴ 280
2
votes
3
replies
2.7k
views
Recommendations for a good motif-finder, for short K-mers?
k-mer motif
updated 8.6 years ago by ▴ 70 • written 8.7 years ago by ▴ 280
0
votes
0
replies
2.7k
views
Comment: C: Recommendations for a good motif-finder, for short K-mers?
8.7 years ago by blur ▴ 280
3
votes
6
replies
7.1k
views
bedtools shuffle vs. random
bedtools
updated 8.7 years ago by ★ 3.4k • written 8.7 years ago by ▴ 280
0
votes
0
replies
7.1k
views
Comment: C: bedtools shuffle vs. random
8.7 years ago by blur ▴ 280
8
votes
2
replies
9.4k
views
The bed12 format
bed12
updated 8.7 years ago by 9.0k • written 8.7 years ago by ▴ 280
1
vote
2
replies
2.0k
views
Consensus secondary RNA stractures
RNA secondary stracture RNAfold
updated 8.7 years ago by 22k • written 8.7 years ago by ▴ 280
1
vote
0
replies
2.2k
views
Comment: C: High throughput RNA secondary structure predictor
8.7 years ago by blur ▴ 280
216 results • Page 3 of 5
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6