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Comment: C: High throughput RNA secondary structure predictor
8.7 years ago by blur ▴ 280
0
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1
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2.2k
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Comment: C: High throughput RNA secondary structure predictor
8.7 years ago by blur ▴ 280
2
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6
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2.2k
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High throughput RNA secondary structure predictor
RNA-Seq RNA secondary strucrure
8.7 years ago by blur ▴ 280
0
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1
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2.0k
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Comment: C: creating an MSA file for 20+ million reads whith non-directional sequences
8.8 years ago by blur ▴ 280
2
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4
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2.0k
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creating an MSA file for 20+ million reads whith non-directional sequences
RNA-Seq RNA MSA
8.8 years ago by blur ▴ 280
0
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1
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3.2k
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Comment: C: bowtie2 --un option problems
8.8 years ago by blur ▴ 280
0
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4
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3.2k
views
bowtie2 --un option problems
bowtie2
updated 8.8 years ago by ★ 3.7k • written 8.8 years ago by ▴ 280
2
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4
replies
3.7k
views
cutadapt --cut option for paired-end reads?
cutadapt
updated 8.9 years ago by ▴ 100 • written 8.9 years ago by ▴ 280
4
votes
13
replies
6.0k
views
uneven paired end reads in bowtie
bowtie2 cutadapt
updated 8.9 years ago by 8.6k • written 8.9 years ago by ▴ 280
0
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0
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6.0k
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Comment: C: uneven paired end reads in bowtie
8.9 years ago by blur ▴ 280
0
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1
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6.0k
views
Comment: C: uneven paired end reads in bowtie
8.9 years ago by blur ▴ 280
0
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2
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6.0k
views
Answer: A: uneven paired end reads in bowtie
8.9 years ago by blur ▴ 280
0
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1
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6.0k
views
Answer: A: uneven paired end reads in bowtie
8.9 years ago by blur ▴ 280
0
votes
1
reply
6.0k
views
Answer: A: uneven paired end reads in bowtie
8.9 years ago by blur ▴ 280
0
votes
0
replies
1.2k
views
Problems setting up cutadapt
cutadapt
8.9 years ago by blur ▴ 280
0
votes
1
reply
4.1k
views
How do I find an example of how to calculate FPKM with cufflinks?
cufflinks fpkm
updated 9.0 years ago by ★ 5.2k • written 9.0 years ago by ▴ 280
1
vote
1
reply
3.3k
views
bcftools soft filters (-s)
bcftools filters
updated 9.0 years ago by 166k • written 9.0 years ago by ▴ 280
7
votes
7
replies
3.4k
views
Bcftools magic string
bcftools
updated 9.0 years ago by 14k • written 9.0 years ago by ▴ 280
0
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1
reply
3.4k
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Comment: C: Bcftools magic string
9.0 years ago by blur ▴ 280
0
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0
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2.9k
views
Comment: C: problem creating PDF file in R(guitar package)
9.0 years ago by blur ▴ 280
1
vote
3
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2.9k
views
problem creating PDF file in R(guitar package)
R; Guitar
9.0 years ago by blur ▴ 280
7
votes
5
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2.4k
views
NGS tutorials (RNA)
NGS
updated 9.0 years ago by 13k • written 9.0 years ago by ▴ 280
2
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5
replies
2.9k
views
PE reads uneven after cutadapt
fastx bowtie
updated 9.0 years ago by 15k • written 9.0 years ago by ▴ 280
0
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0
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4.2k
views
Comment: C: determining read depth for every position in a sequence
9.0 years ago by blur ▴ 280
4
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3
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4.2k
views
determining read depth for every position in a sequence
RNA samtools read depth
updated 9.0 years ago by ★ 1.2k • written 9.0 years ago by ▴ 280
0
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2
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2.7k
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Comment: C: Bowtie2 have low global alignment rates in RNA-seq
9.0 years ago by blur ▴ 280
0
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1
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2.7k
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Comment: C: Bowtie2 have low global alignment rates in RNA-seq
9.0 years ago by blur ▴ 280
1
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6
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2.7k
views
Bowtie2 have low global alignment rates in RNA-seq
eCLIP BOWTIE2
9.0 years ago by blur ▴ 280
0
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1
reply
2.9k
views
Comment: C: MACS2 and duplicates
9.0 years ago by blur ▴ 280
1
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3
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2.9k
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MACS2 and duplicates
macs2
9.0 years ago by blur ▴ 280
0
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0
replies
1.8k
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Comment: C: cutadapt -o versus >
9.1 years ago by blur ▴ 280
0
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1
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1.8k
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Comment: C: cutadapt -o versus >
9.1 years ago by blur ▴ 280
2
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4
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1.8k
views
cutadapt -o versus >
cutadapt
updated 9.1 years ago by 105k • written 9.1 years ago by ▴ 280
3
votes
3
replies
4.4k
views
trim_galore finds a different adaptor than the one I expected...
trim galore
updated 9.1 years ago by ★ 5.0k • written 9.1 years ago by ▴ 280
0
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0
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4.4k
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Comment: C: trim_galore finds a different adaptor than the one I expected...
9.1 years ago by blur ▴ 280
0
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1
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2.6k
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Comment: C: UCSC peak calling - weird results
9.1 years ago by blur ▴ 280
0
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3
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2.6k
views
UCSC peak calling - weird results
ucsc peak-calling
updated 9.1 years ago by ★ 5.2k • written 9.1 years ago by ▴ 280
0
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0
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2.5k
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Comment: C: FASTX error - quality score
9.1 years ago by blur ▴ 280
0
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2
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2.5k
views
FASTX error - quality score
FASTX
9.1 years ago by blur ▴ 280
3
votes
2
replies
1.3k
views
keeping trimmed edges
trimming
updated 9.1 years ago by 105k • written 9.1 years ago by ▴ 280
1
vote
1
reply
4.6k
views
Bam to WIG
bam
9.1 years ago by blur ▴ 280
2
votes
4
replies
19k
views
R1 and R2 in sequencing data
NGS
updated 9.1 years ago by ▴ 130 • written 9.1 years ago by ▴ 280
0
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0
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19k
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Comment: C: R1 and R2 in sequencing data
9.1 years ago by blur ▴ 280
0
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0
replies
1.9k
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Comment: C: picard-tool markduplicate gets stuck in traversing
9.1 years ago by blur ▴ 280
0
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1
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1.9k
views
Comment: C: picard-tool markduplicate gets stuck in traversing
9.1 years ago by blur ▴ 280
0
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0
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1.9k
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Comment: C: picard-tool markduplicate gets stuck in traversing
9.1 years ago by blur ▴ 280
6
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7
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1.9k
views
picard-tool markduplicate gets stuck in traversing
picard tools
9.1 years ago by blur ▴ 280
0
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0
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9.6k
views
Comment: C: How do I find unmapped reads in my sam file?
9.1 years ago by blur ▴ 280
0
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1
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9.6k
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Comment: C: How do I find unmapped reads in my sam file?
9.1 years ago by blur ▴ 280
2
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5
replies
9.6k
views
How do I find unmapped reads in my sam file?
SAM
updated 9.1 years ago by ▴ 700 • written 9.1 years ago by ▴ 280
216 results • Page 4 of 5
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