User: magda

gravatar for magda
magda20
Reputation:
20
Status:
New User
Location:
Portugal
Last seen:
2 years ago
Joined:
4 years, 6 months ago
Email:
m********@gmail.com

Posts by magda

<prev • 4 results • page 1 of 1 • next >
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Should I assume that the genotype of the 1000 Genomes project individuals in positions that are not in the vcf file, are homozygous for the reference allele?
... I want to merge my variant data with those from the 1000 genomes project, but which genotype can I assume that the 1000 Genomes project individuals have in the positions that are not included in their vcf files. Should I assume that they are homozygous for the reference allele? But what if in that p ...
vcf reference allele 1000 genomes project written 2.1 years ago by magda20
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How to convert gd_genotype format to plink?
... Hi, I got public data from galaxy that is in gd_genotype format, however I want to convert it to plink or .vcf format, and don't find any tool to do this. Galaxy can convert from .vcf, etc to gd_snp or gd_genotype format, but not the other way round. Do you know some way to do this? Thank you, ...
galaxy gd_genotype snp written 2.4 years ago by magda20
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Comment: C: List of Snps On Affymetrix Human Immune and Inflammatory 9k SNP Array
... Thank you!, it has worked! :) ...
written 4.5 years ago by magda20
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List of Snps On Affymetrix Human Immune and Inflammatory 9k SNP Array
... Where can I find the rs ids of SNPs on the the Affymetrix Human Immune and inflammatory 9k SNP array? I have looked in Affymetrix, in UCSC database, ensembl, and I just cannot find it.  Thank you ...
array snps written 4.5 years ago by magda20

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