User: bgold04

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bgold040
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Posts by bgold04

<prev • 19 results • page 1 of 2 • next >
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Comment: A: awk syntax error
... Thanks, this is a beautiful thing. I would be happy to discuss the one time I did this with you privately. ...
written 8 weeks ago by bgold040
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Comment: A: awk syntax error
... Hi! Here is the hoped for output from the FILE given above: !g.555387_555397dupCCCGCGCGCCC %Likely_benign @SHOX !g.585121C>G %Likely_benign @SHOX ...
written 8 weeks ago by bgold040
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Comment: A: awk syntax error
... Alex, it just hangs when I do this..., Pierre is right, I need another approach. awk -F '\t' '{for(i=1 i < NF;i++ && j=1 j < NF;j++) if($i ~ /@/ && $j ~ /!/) {print $i"\011"$j}}' FILE > OUTPUT ...
written 8 weeks ago by bgold040
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Comment: A: awk syntax error
... OK, back to drawing board. Thanks. ...
written 8 weeks ago by bgold040
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Comment: C: awk syntax error
... initialization: set i, j, k counters one for each of the desired word prefixes, condition: select the word prefixes @, ! and % and print them out. Go to the next line until the file is exhausted. No? ...
written 8 weeks ago by bgold040
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awk syntax error
... I am just not seeing what my problem is here: FILE Y 555381 555382 256191 . A AGCCCCCCGCGC . ALLELEID 257892 CLNDISDB MedGen CN169374 CLNDN not_specified CLNHGVS NC_000024.9 !g.555387_555397dupCCCGCGCGCCC CLNREVSTAT criteria_provided,_single_submitter CLINSIG %Likely_benign CLNVC Duplication C ...
software error written 8 weeks ago by bgold040
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Comment: A: Request Efficient Approach to concatenating and compressing PATRIC .fna files
... Thank you for the opportunity to ask a question! ...
written 4 months ago by bgold040
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Comment: C: Request Efficient Approach to concatenating and compressing PATRIC .fna files
... Pretend you are in a class trying to figure out an unknown most definitively in the least possible time. That's the problem I am working on. ...
written 4 months ago by bgold040
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Comment: A: Request Efficient Approach to concatenating and compressing PATRIC .fna files
... Thank you for the very insightful comment, jrj.healey ...
written 4 months ago by bgold040
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Comment: A: Request Efficient Approach to concatenating and compressing PATRIC .fna files
... Thank you for your kind and insightful questions and suggestions. ...
written 4 months ago by bgold040

Latest awards to bgold04

Popular Question 2.2 years ago, created a question with more than 1,000 views. For bcftools filter or bcftools isec to EXCLUDE dbSNP snps
Popular Question 2.2 years ago, created a question with more than 1,000 views. For Requesting help building a bacterial database file consistent with gibVirus.fa

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