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3
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4
replies
12k
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What absolute copy number would you call an Amplification?
SNP genome snparray copy-number
updated 2.0 years ago by 43k • written 9.2 years ago by ▴ 30
0
votes
1
reply
774
views
logRs using a panel of normal
SNP snparray
4.6 years ago by senowinski ▴ 30
0
votes
0
replies
586
views
How to make a panel of normals to extract logRs of unmatched data
SNP R
4.8 years ago by senowinski ▴ 30
3
votes
1
reply
3.0k
views
Absolute Copy Number from low pass WGS
genome sequencing SNP
updated 5.2 years ago by ▴ 20 • written 7.2 years ago by ▴ 30
0
votes
1
reply
2.6k
views
Comment: C: for low coverage RNAseq how many reads assigned is the bare minimum for differen
5.2 years ago by senowinski ▴ 30
8
votes
6
replies
2.6k
views
for low coverage RNAseq how many reads assigned is the bare minimum for differential gene expression analysis
RNA-Seq
5.2 years ago by senowinski ▴ 30
1
vote
1
reply
1.1k
views
HTSeq error: local variable 'NH' referenced before assignment
HTSeq RNA-Seq
updated 9 months ago by 43k • written 5.2 years ago by ▴ 30
0
votes
0
replies
2.2k
views
Comment: C: How to identify the important SNPs from several GWAS studies
6.6 years ago by senowinski ▴ 30
0
votes
1
reply
1.3k
views
TCGA PRAD Data Germline BRCA1/2 status
sequencing
6.6 years ago by senowinski ▴ 30
0
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0
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1.3k
views
Answer: A: TCGA PRAD Data Germline BRCA1/2 status
6.6 years ago by senowinski ▴ 30
1
vote
3
replies
2.2k
views
How to identify the important SNPs from several GWAS studies
SNP
updated 6.6 years ago by ★ 5.2k • written 6.6 years ago by ▴ 30
1
vote
3
replies
1.2k
views
Combining fastq/sorted sam files from same libraries run on HiSeq and NextSeq
next-gen sequencing
updated 6.6 years ago by 104k • written 6.6 years ago by ▴ 30
0
votes
0
replies
1.2k
views
Comment: C: Combining fastq/sorted sam files from same libraries run on HiSeq and NextSeq
6.6 years ago by senowinski ▴ 30
0
votes
1
reply
1.1k
views
what is the lowest coverage the human genome can be sequenced at to provide roughly the same resolution as SNP6?
sequencing SNP next-gen
updated 6.7 years ago by 20k • written 6.7 years ago by ▴ 30
1
vote
11
replies
5.0k
views
bwa mem not aligning
alignment
7.1 years ago by senowinski ▴ 30
0
votes
3
replies
5.0k
views
Comment: C: bwa mem not aligning
7.1 years ago by senowinski ▴ 30
0
votes
1
reply
5.0k
views
Comment: C: bwa mem not aligning
7.1 years ago by senowinski ▴ 30
0
votes
0
replies
5.0k
views
Comment: C: bwa mem not aligning
7.1 years ago by senowinski ▴ 30
0
votes
0
replies
5.0k
views
Comment: C: bwa mem not aligning
7.1 years ago by senowinski ▴ 30
0
votes
1
reply
3.2k
views
Varscan 2 output
next-gen varscan varscan2
updated 23 months ago by 43k • written 9.1 years ago by ▴ 30
0
votes
1
reply
12k
views
Comment: Comment: What absolute copy number would you call an Amplification?
updated 2.0 years ago by 43k • written 9.2 years ago by ▴ 30
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