User: Charles Pepe-Ranney

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Posts by Charles Pepe-Ranney

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Comment: C: BBSketch - A Tool for Rapid Sequence Comparison
... This is great. Thanks! I see documentation for building sketches by sequence or taxon -- do you have a recipe for building a reference database where the sketches each represent an assembly/genome? ...
written 8 days ago by Charles Pepe-Ranney0
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Comment: C: dedupe.sh output from BBTools
... Thanks, had no idea I could tag a specific user. ...
written 2.7 years ago by Charles Pepe-Ranney0
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dedupe.sh output from BBTools
... Wondering what the dedupe contig overlap output actually is from BBtools. Can't quite figure it out from the documentation. Clusters are reads that overlap and the regular outfile contaings the rest of the reads with containments/duplicates removed? If I invoke the "processclusters" flag with "fixmu ...
bbmap bbtools dedupe deduplicate contigs written 2.7 years ago by Charles Pepe-Ranney0 • updated 2.7 years ago by Brian Bushnell14k

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Popular Question 2.2 years ago, created a question with more than 1,000 views. For dedupe.sh output from BBTools

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