User: BioHazzard

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BioHazzard0
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Posts by BioHazzard

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Comment: C: RNA-seq DESeq2 : p-values and venn plots in same analysis
... Thanks for the reply. My question is less about how to graph the data but more about how to interpret the data. If I am trying to make statements such as "275 genes showed modified expression only in condition A", they the venn diagram could lead me to make such a statement. However, I am reluctan ...
written 11 days ago by BioHazzard0
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Comment: C: RNA-seq DESeq2 : p-values and venn plots in same analysis
... Can you recommend me an image hosting service that you know you can see? ...
written 11 days ago by BioHazzard0
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RNA-seq DESeq2 : p-values and venn plots in same analysis
... I am doing differential expression analysis. I am comparing two different experiments, each experiment consisting of two treatments and their respective controls in duplicate. I used DESeq2 to generate a distinct results object for each of the 4 control/treatment pairs and am doing downstream analy ...
deseq2 venn rna-seq heatmap written 11 days ago by BioHazzard0 • updated 11 days ago by devbt1510
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Question about the possibility of comparing samples based on within sample z-score
... I have a novel cell line which I would like to compare to tumors of the same species by means of a kind of signature. I was wondering if the following approach could be valid, I am not a bioinformatitian.  I was thinking about expressing the expression of each gene as a z-score with respect to all ...
gene written 3.3 years ago by BioHazzard0 • updated 3.3 years ago by Deepak Tanwar3.8k

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