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Comment: C: Should I normalize read counts if I want to run plotPCA?
4.0 years ago by c_u ▴ 520
18
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10
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5.3k
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Should I normalize read counts if I want to run plotPCA?
RNA-Seq
updated 5 weeks ago by • 0 • written 4.0 years ago by ▴ 520
0
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1
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5.3k
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Comment: C: Should I normalize read counts if I want to run plotPCA?
4.0 years ago by c_u ▴ 520
0
votes
1
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5.3k
views
Comment: C: Should I normalize read counts if I want to run plotPCA?
4.0 years ago by c_u ▴ 520
0
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1
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1.9k
views
Comment: C: Can I use DESeq2 for non-coding RNA?
4.1 years ago by c_u ▴ 520
9
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7
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1.9k
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Can I use DESeq2 for non-coding RNA?
RNA-Seq DESeq2 noncoding
updated 4.1 years ago by ★ 1.1k • written 4.2 years ago by ▴ 520
0
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0
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6.4k
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Comment: C: Any One please provide protocol for Analysing long noncoding RNA illumina NGS da
4.2 years ago by c_u ▴ 520
0
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0
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14k
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Comment: C: Difference between GTF file with CHR and without CHR. ENSEMBL
4.2 years ago by c_u ▴ 520
1
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1
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1.0k
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Comment: C: Can fusion transcript softwares distinguish between gene-fusions and transcript-
4.2 years ago by c_u ▴ 520
3
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3
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1.0k
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Can fusion transcript softwares distinguish between gene-fusions and transcript-fusions?
RNA-Seq Fusion
4.2 years ago by c_u ▴ 520
0
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0
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1.2k
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Comment: C: How to perform transcriptomic clustering to find bad samples?
4.2 years ago by c_u ▴ 520
0
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1
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1.2k
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Comment: C: How to perform transcriptomic clustering to find bad samples?
4.2 years ago by c_u ▴ 520
5
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8
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1.2k
views
How to perform transcriptomic clustering to find bad samples?
RNA-Seq transcriptome
4.2 years ago by c_u ▴ 520
0
votes
1
reply
3.5k
views
Rename samples for plotting using plotPCA
RNA-Seq DESeq2
4.2 years ago by c_u ▴ 520
0
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0
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3.5k
views
Answer: A: Rename samples for plotting using plotPCA
4.2 years ago by c_u ▴ 520
0
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2
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1.2k
views
Comment: C: How to perform transcriptomic clustering to find bad samples?
4.2 years ago by c_u ▴ 520
0
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1
reply
1.2k
views
Comment: C: How to perform transcriptomic clustering to find bad samples?
4.2 years ago by c_u ▴ 520
0
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0
replies
1.4k
views
Comment: C: Suggestion needed for finding fusion transcripts
4.2 years ago by c_u ▴ 520
0
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1
reply
1.4k
views
Comment: C: Suggestion needed for finding fusion transcripts
4.2 years ago by c_u ▴ 520
7
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7
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1.4k
views
Suggestion needed for finding fusion transcripts
RNA-Seq fusion-transcripts
4.2 years ago by c_u ▴ 520
0
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0
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1.4k
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Comment: C: Suggestion needed for finding fusion transcripts
4.2 years ago by c_u ▴ 520
0
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1
reply
18k
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Comment: C: Regarding Split reads and discordant reads
4.3 years ago by c_u ▴ 520
0
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0
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1.4k
views
Comment: C: Suggestion needed for finding fusion transcripts
4.3 years ago by c_u ▴ 520
1
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1
reply
1.8k
views
Answer: A: What were the most impactful Bioinformatics papers published this year
4.3 years ago by c_u ▴ 520
22
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12
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1.8k
views
6 follow
Forum: What were the most impactful Bioinformatics papers published this year
papers publications
updated 10 months ago by 43k • written 4.3 years ago by ▴ 520
0
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1
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2.2k
views
Comment: C: Program to find genes up/down-regulated by a given gene
4.3 years ago by c_u ▴ 520
5
votes
9
replies
2.2k
views
Program to find genes up/down-regulated by a given gene
geo upregulated gene downregulated
updated 13 months ago by 43k • written 9.2 years ago by ▴ 520
0
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0
replies
3.1k
views
Comment: C: tximport output should be integer values, IS NOT.
4.3 years ago by c_u ▴ 520
3
votes
5
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3.1k
views
tximport output should be integer values, IS NOT.
RNA-Seq stringtie
4.4 years ago by c_u ▴ 520
0
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0
replies
3.1k
views
Comment: C: tximport output should be integer values, IS NOT.
4.4 years ago by c_u ▴ 520
0
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1
reply
3.1k
views
Comment: C: tximport output should be integer values, IS NOT.
4.4 years ago by c_u ▴ 520
0
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0
replies
889
views
Answer: A: name of the figure
4.4 years ago by c_u ▴ 520
11
votes
6
replies
2.6k
views
Is this a good way to find non-coding transcripts from stranded RNA-seq data?
RNA-Seq assembly
updated 4.4 years ago by ▴ 140 • written 4.4 years ago by ▴ 520
0
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1
reply
14k
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Comment: C: How to perform strand-aware (RNA-Seq) mapping using STAR?
4.4 years ago by c_u ▴ 520
0
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1
reply
14k
views
Comment: C: How to perform strand-aware (RNA-Seq) mapping using STAR?
4.4 years ago by c_u ▴ 520
0
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0
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14k
views
Comment: C: How to perform strand-aware (RNA-Seq) mapping using STAR?
4.4 years ago by c_u ▴ 520
0
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0
replies
1.3k
views
Comment: C: lncRNA Detection with Tuxedo Suite
4.4 years ago by c_u ▴ 520
0
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0
replies
2.6k
views
Comment: C: Best way to find novel non-coding transcripts from stranded RNA-seq data
4.4 years ago by c_u ▴ 520
0
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0
replies
2.6k
views
Comment: C: Best way to find novel non-coding transcripts from stranded RNA-seq data
4.4 years ago by c_u ▴ 520
0
votes
1
reply
14k
views
Comment: C: How to perform strand-aware (RNA-Seq) mapping using STAR?
4.4 years ago by c_u ▴ 520
0
votes
1
reply
14k
views
Comment: C: How to perform strand-aware (RNA-Seq) mapping using STAR?
4.4 years ago by c_u ▴ 520
0
votes
1
reply
14k
views
Comment: C: How to perform strand-aware (RNA-Seq) mapping using STAR?
4.4 years ago by c_u ▴ 520
0
votes
1
reply
14k
views
Comment: C: How to perform strand-aware (RNA-Seq) mapping using STAR?
4.4 years ago by c_u ▴ 520
16
votes
15
replies
14k
views
How to perform strand-aware (RNA-Seq) mapping using STAR?
RNA-Seq
4.4 years ago by c_u ▴ 520
20
votes
4
replies
7.6k
views
Difference between abundance and counts in RNA-Seq
RNA-Seq tximport
4.5 years ago by c_u ▴ 520
1
vote
0
replies
7.6k
views
Comment: C: Difference between abundance and counts
4.5 years ago by c_u ▴ 520
0
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1
reply
1.1k
views
Comment: C: convert MSTRG to human-readable format
4.5 years ago by c_u ▴ 520
0
votes
0
replies
1.5k
views
Comment: C: I get different ENSG IDs for the same MSTRG ID
4.5 years ago by c_u ▴ 520
0
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0
replies
2.5k
views
Comment: C: StringTie - A transcript matching to multiple genes
4.5 years ago by c_u ▴ 520
0
votes
0
replies
3.1k
views
Comment: C: Issue with DESeq2: Unable to create a DESeqDataSet because names in colData don'
4.5 years ago by c_u ▴ 520
174 results • Page 2 of 4
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