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Answer: A: Retrieve Single Vcf From List Of Snp Rs#
updated 6.8 years ago by 35k • written 11.2 years ago by ★ 1.0k
0
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2
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4.4k
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Answer: A: Filtering on the minor allele in VCFtools
7.9 years ago by Adam ★ 1.0k
0
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1
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2.4k
views
Answer: Answer: 1000 genomes technical data: match exon capture probes to samples
updated 18 months ago by 43k • written 8.7 years ago by ★ 1.0k
1
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0
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2.7k
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Answer: A: How to obtain human genotype data from dpSNP ftp?
8.8 years ago by Adam ★ 1.0k
0
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1
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2.4k
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Answer: Answer: Recombination rate cut off values
updated 15 months ago by 43k • written 8.9 years ago by ★ 1.0k
5
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2
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3.6k
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Answer: Answer: 1000G high coverage depth of sequencing?
updated 15 months ago by 43k • written 8.9 years ago by ★ 1.0k
0
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1
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5.0k
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Answer: Answer: Good value of r2 in pruned data
updated 23 months ago by 43k • written 9.1 years ago by ★ 1.0k
0
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1
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9.0k
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Answer: A: Picking random SNPs from 1000 Genomes using Vcftools
9.1 years ago by Adam ★ 1.0k
1
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1
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3.6k
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Answer: Answer: HaploView error messages for HapMap3 and 1000Genomes phase 3 data!
updated 2.1 years ago by 43k • written 9.3 years ago by ★ 1.0k
1
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1
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2.5k
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Answer: A: 1000G mask with VCFtools
9.4 years ago by Adam ★ 1.0k
3
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1
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6.3k
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Answer: Answer: Filterout biallelic SNPs from multiple VCF files.
updated 2.2 years ago by 43k • written 9.4 years ago by ★ 1.0k
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0
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4.6k
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Answer: Answer: How to import a big matrix into matlab?
updated 2.2 years ago by 43k • written 9.4 years ago by ★ 1.0k
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0
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2.2k
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Answer: Answer: Best way to phase regions with known recombinations?
updated 2.2 years ago by 43k • written 9.4 years ago by ★ 1.0k
5
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0
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5.9k
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Answer: Answer: Why do genes have so many synonyms?
updated 2.2 years ago by 43k • written 9.5 years ago by ★ 1.0k
2
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0
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4.4k
views
Answer: Answer: Linkage disequilibrium analysis of EUR populations from 1000 Genomes phase3 data
updated 2.3 years ago by 43k • written 9.5 years ago by ★ 1.0k
1
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1
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3.2k
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Answer: Answer: calculating LD for SNPs with more than two alleles
updated 2.2 years ago by 43k • written 9.5 years ago by ★ 1.0k
2
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1
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7.1k
views
Answer: Answer: VCFtools LD calculations only for pairs that include a single SNP of interest
updated 3.1 years ago by 43k • written 9.5 years ago by ★ 1.0k
0
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0
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4.2k
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Answer: A: Calculating genotype likelihood from vcf file which has allele frequency, total
updated 3.1 years ago by 43k • written 9.5 years ago by ★ 1.0k
1
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1
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4.3k
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Answer: A: remove private alleles from a vcf file
9.9 years ago by Adam ★ 1.0k
0
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1
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3.8k
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Answer: A: Vcf: How To Indicate Reference Allele Not Found?
10.2 years ago by Adam ★ 1.0k
0
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1
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5.5k
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Answer: A: Weir-Fst Vcftools
10.4 years ago by Adam ★ 1.0k
2
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0
replies
26k
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Answer: A: Converting Gvcf Files Into Vcf
10.6 years ago by Adam ★ 1.0k
3
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0
replies
9.0k
views
Answer: A: What Are Numbers Every Bioinformatician Should Know?
10.7 years ago by Adam ★ 1.0k
2
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1
reply
19k
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Answer: A: Extracting Genotype Information From Vcf
10.7 years ago by Adam ★ 1.0k
1
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1
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7.5k
views
Answer: A: Genotype Frequencies Calculation
10.7 years ago by Adam ★ 1.0k
9
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3
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13k
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Answer: A: How To Perform A Fst (Fixation Index) Calculation Over A Vcf File Using A Slidin
10.9 years ago by Adam ★ 1.0k
0
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0
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16k
views
Answer: A: Vcftools: Filtering By Multiple Regions (--Positions Flag?)
11.0 years ago by Adam ★ 1.0k
2
votes
0
replies
4.7k
views
Answer: A: Extract Individual Genotypes From 1000 Genomes When Snp Not In Vcf
11.2 years ago by Adam ★ 1.0k
1
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0
replies
4.8k
views
Answer: A: Represent Precise Deletion In Vcf
11.2 years ago by Adam ★ 1.0k
6
votes
1
reply
2.6k
views
Answer: A: Sequence Haplotypes From 1Kg Project Variants
11.2 years ago by Adam ★ 1.0k
3
votes
1
reply
4.9k
views
Answer: A: Filtering Vcf File For Fixed Substitutions
11.3 years ago by Adam ★ 1.0k
2
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0
replies
50k
views
Answer: A: Filtering Vcf File
11.3 years ago by Adam ★ 1.0k
1
vote
0
replies
8.1k
views
Answer: A: Vcftools Fst Calculation For Single Snps
11.4 years ago by Adam ★ 1.0k
5
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1
reply
3.2k
views
Answer: A: From Blog Posts To Research Papers; Successful Cases?
11.5 years ago by Adam ★ 1.0k
5
votes
2
replies
9.6k
views
Answer: A: How To Extract A Specific Population Vcf File From 1000G Genotypes Vcf File
11.5 years ago by Adam ★ 1.0k
1
vote
0
replies
27k
views
Answer: A: Which Bioinformatics Tools Are Written In Python
11.7 years ago by Adam ★ 1.0k
1
vote
0
replies
2.0k
views
Answer: A: How Can I Simulate A Shrinking Population With A Selective Sweep?
11.7 years ago by Adam ★ 1.0k
1
vote
1
reply
2.9k
views
Answer: A: Counting Snps From 1000 Genome Data
11.8 years ago by Adam ★ 1.0k
5
votes
1
reply
14k
views
Answer: A: Vcftools Weir-Fst-Pop
11.9 years ago by Adam ★ 1.0k
2
votes
0
replies
9.8k
views
Answer: A: Vcftools Can'T Create Ped Map File Due To Ulimit Of Allowed Open Files.
11.9 years ago by Adam ★ 1.0k
1
vote
1
reply
2.9k
views
Answer: A: Simulation Negative Selection
12.0 years ago by Adam ★ 1.0k
2
votes
3
replies
7.3k
views
Answer: A: Vcftools Runs Of Homozygosity Option
12.0 years ago by Adam ★ 1.0k
0
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0
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5.7k
views
Answer: A: Hardy-Weinberg Option In Vcftools
12.1 years ago by Adam ★ 1.0k
4
votes
1
reply
5.2k
views
Answer: A: Using Tabix And Vcf Tools To Get Cnv / Sv Frequencies From 1000 Genomes Data
12.4 years ago by Adam ★ 1.0k
2
votes
0
replies
4.0k
views
Answer: A: Extracting A Rs* Genotype Using Vcf Tools
12.6 years ago by Adam ★ 1.0k
1
vote
0
replies
5.9k
views
Answer: A: Masked Or Unmasked Dna Reference For Sam2Vcf.Pl
12.9 years ago by Adam ★ 1.0k
3
votes
0
replies
8.0k
views
Answer: A: Changing Genome Coordinates For Vcf
13.0 years ago by Adam ★ 1.0k
3
votes
0
replies
5.5k
views
Answer: A: Concordance Of Ngs Data To Wg Snp Array Data
13.0 years ago by Adam ★ 1.0k
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