User: Drio

gravatar for Drio
Drio890
Reputation:
890
Status:
Trusted
Location:
United States
Last seen:
1 year, 5 months ago
Joined:
5 years, 11 months ago
Email:
d*********@gmail.com

Posts by Drio

<prev • 60 results • page 1 of 6 • next >
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Comment: C: Dnaism: Exploring Genomic Datasets On The Web With Horizon Charts.
... I want to publish this. What journals do you think are suitable for this type of work? Thanks. ...
written 2.6 years ago by Drio890
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Not having root access sucks; installing software without root privileges
... My development cycle involves writing and testing my software and then run it in some sort of HPC cluster. My pipelines and scripts typically depend on thirty party software (samtools, bwa, picard, etc...) Keeping those packages up to date in my machine is easy, it is not in the cluster. The main i ...
cluster hpc unix linux written 2.8 years ago by Drio890
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Comment: C: Dnaism: Exploring Genomic Datasets On The Web With Horizon Charts.
... Thank you for the feedback Istvan. You are right, I should introduce a light example first to get people familiar with this viz technique. I'll work on that. The examples in the docs are, arguably, displaying 500000 data points for 25 samples in relatively big genomic region. ...
written 3.0 years ago by Drio890
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Tool: Dnaism: Exploring Genomic Datasets On The Web With Horizon Charts.
... I have been working on a library to visualize genomic datasets using Horizon Charts. I'd like to introduce it to the Biostar community, its name is DNAism. I hope you find time to take a look and play with it, any feedback is welcome. Thank you, -drd ...
visualization tool written 3.0 years ago by Drio890
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Answer: A: Best Way To Learn Bioinformatics For System Level Programmers.
... I found this book particularly useful when I started to work with genomic datasets. It helped me to get my head around the biology, which in the end I think is what matters the most. http://cl.ly/image/0C3v2g093m0d/download/999703.jpg     http://www.larrygonick.com/wp-content/uploads/2011/12/G ...
written 3.0 years ago by Drio890
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Comment: C: Would You Be Interested In Having A Usesthis Like Site For The Bioinformatics Co
... You are also one of the top BS users. Would you like to participate? ...
written 3.0 years ago by Drio890
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Comment: C: Would You Be Interested In Having A Usesthis Like Site For The Bioinformatics Co
... Thanks! Sounds good. ...
written 3.0 years ago by Drio890
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Comment: C: Would You Be Interested In Having A Usesthis Like Site For The Bioinformatics Co
... Ei Chris, you are up there in the user list. Would you like to participate in the project? ...
written 3.0 years ago by Drio890
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Comment: C: Would You Be Interested In Having A Usesthis Like Site For The Bioinformatics Co
... Ok. I will send a few emails and see what reaction I get, specially from the big names. ...
written 3.0 years ago by Drio890
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Comment: C: Would You Be Interested In Having A Usesthis Like Site For The Bioinformatics Co
... Yes, I explored the option of using his code (https://github.com/drio/usesthis) but there were a few reasons why I decided to write my own. The most important one being that I wanted to have a code base that I can easily modify to add new features and I am more familiar with python than with ruby. A ...
written 3.0 years ago by Drio890

Latest awards to Drio

Supporter 3.0 years ago, voted at least 25 times.
Teacher 5.6 years ago, created an answer with at least 3 up-votes. For A: Seed And Extend Algorithm
Teacher 5.7 years ago, created an answer with at least 3 up-votes. For A: Existing Tools For Generating Web Based Network Visualisation
Teacher 5.7 years ago, created an answer with at least 3 up-votes. For A: Picard Markduplicates
Teacher 5.8 years ago, created an answer with at least 3 up-votes. For A: Lua For Bioinformatics?
Teacher 5.8 years ago, created an answer with at least 3 up-votes. For A: From Compressed Bam To Fastq
Teacher 5.8 years ago, created an answer with at least 3 up-votes. For A: Which Are The Best Collections Of Bioinformatics Tools For Ngs Analysis And Sequ
Teacher 5.9 years ago, created an answer with at least 3 up-votes. For A: Indel Notation In Variant Calling
Teacher 5.9 years ago, created an answer with at least 3 up-votes. For A: Structural Variation Detection Software Using Next Generation Sequencing
Teacher 5.9 years ago, created an answer with at least 3 up-votes. For A: Problem With Ensembl Variant Effect Predictor Stand Alone Perl Tool
Teacher 6.0 years ago, created an answer with at least 3 up-votes. For A: Problem Running Blast Jobs.
Teacher 6.0 years ago, created an answer with at least 3 up-votes. For A: Generating Srf Files From Solid Reads For Archiving - Best Practice?

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