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0
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0
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6.3k
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Comment:
C: Make fasta file from SNPs in two vcf files
10.5 years ago by
Matt Shirley
10k
0
votes
0
replies
3.8k
views
Comment:
Comment: Bismark out put in IGV
updated 2.8 years ago by
Ram
45k • written 10.5 years ago by
Matt Shirley
10k
0
votes
0
replies
21k
views
Comment:
Comment: Extract fasta sequences from a large file using a list of names
updated 2.8 years ago by
Ram
45k • written 10.5 years ago by
Matt Shirley
10k
0
votes
1
reply
6.3k
views
Answer:
Answer: Make fasta file from SNPs in two vcf files
updated 2.8 years ago by
Ram
45k • written 10.5 years ago by
Matt Shirley
10k
0
votes
1
reply
21k
views
Comment:
Comment: Extract fasta sequences from a large file using a list of names
updated 2.8 years ago by
Ram
45k • written 10.5 years ago by
Matt Shirley
10k
0
votes
1
reply
21k
views
Comment:
Comment: Extract fasta sequences from a large file using a list of names
updated 2.8 years ago by
Ram
45k • written 10.5 years ago by
Matt Shirley
10k
0
votes
1
reply
21k
views
Comment:
Comment: Extract fasta sequences from a large file using a list of names
updated 2.8 years ago by
Ram
45k • written 10.5 years ago by
Matt Shirley
10k
0
votes
1
reply
21k
views
Comment:
Comment: Extract fasta sequences from a large file using a list of names
updated 2.8 years ago by
Ram
45k • written 10.5 years ago by
Matt Shirley
10k
0
votes
1
reply
21k
views
Comment:
Comment: Extract fasta sequences from a large file using a list of names
updated 2.8 years ago by
Ram
45k • written 10.5 years ago by
Matt Shirley
10k
0
votes
0
replies
21k
views
Comment:
Comment: Extract fasta sequences from a large file using a list of names
updated 2.8 years ago by
Ram
45k • written 10.5 years ago by
Matt Shirley
10k
0
votes
1
reply
21k
views
Comment:
Comment: Extract fasta sequences from a large file using a list of names
updated 2.8 years ago by
Ram
45k • written 10.5 years ago by
Matt Shirley
10k
2
votes
2
replies
21k
views
Answer:
Answer: Extract fasta sequences from a large file using a list of names
updated 2.8 years ago by
Ram
45k • written 10.5 years ago by
Matt Shirley
10k
0
votes
0
replies
6.8k
views
Comment:
Comment: bedtools getfasta does not give a proper fasta output
updated 3.4 years ago by
Ram
45k • written 10.6 years ago by
Matt Shirley
10k
1
vote
1
reply
6.8k
views
Comment:
Comment: bedtools getfasta does not give a proper fasta output
updated 3.4 years ago by
Ram
45k • written 10.6 years ago by
Matt Shirley
10k
0
votes
0
replies
8.1k
views
Answer:
Answer: Split a concatenated alignment in multiple files
updated 3.5 years ago by
Ram
45k • written 10.6 years ago by
Matt Shirley
10k
1
vote
0
replies
4.2k
views
Answer:
Answer: Generating a bedgraph from a scored bed file
updated 3.5 years ago by
Ram
45k • written 10.7 years ago by
Matt Shirley
10k
0
votes
1
reply
2.5k
views
Answer:
Answer: Running a script for each of the Reference .fa files along with their respective
updated 3.5 years ago by
Ram
45k • written 10.7 years ago by
Matt Shirley
10k
0
votes
0
replies
7.3k
views
Comment:
Comment: is there any way to covert SRA files to Fasta in R ?
updated 3.5 years ago by
Ram
45k • written 10.7 years ago by
Matt Shirley
10k
0
votes
1
reply
7.3k
views
Comment:
C: is there any way to covert SRA files to Fasta in R ?
10.7 years ago by
Matt Shirley
10k
0
votes
0
replies
2.8k
views
Comment:
Comment: Multiple fasta to one fasta in galaxy
updated 3.5 years ago by
Ram
45k • written 10.7 years ago by
Matt Shirley
10k
1
vote
0
replies
5.0k
views
Answer:
Answer: Is this a .bed file? If so, why is it not importing into IGV properly?
updated 3.5 years ago by
Ram
45k • written 10.7 years ago by
Matt Shirley
10k
0
votes
0
replies
3.0k
views
Comment:
C: compare and trim fasta files by header ID
10.7 years ago by
Matt Shirley
10k
0
votes
1
reply
3.0k
views
Comment:
Comment: compare and trim fasta files by header ID
updated 3.5 years ago by
Ram
45k • written 10.7 years ago by
Matt Shirley
10k
0
votes
0
replies
3.0k
views
Answer:
Answer: compare and trim fasta files by header ID
updated 3.5 years ago by
Ram
45k • written 10.7 years ago by
Matt Shirley
10k
4
votes
0
replies
11k
views
Answer:
Answer: filter out fasta File by pattern
updated 3.5 years ago by
Ram
45k • written 10.7 years ago by
Matt Shirley
10k
0
votes
1
reply
22k
views
Comment:
C: Extract sequence with header from a fasta file with specific ID given in another
10.7 years ago by
Matt Shirley
10k
0
votes
0
replies
5.8k
views
Comment:
Comment: Extracting Sequence from a FASTA file using biopython
updated 3.6 years ago by
Ram
45k • written 10.8 years ago by
Matt Shirley
10k
0
votes
1
reply
5.8k
views
Comment:
Comment: Extracting Sequence from a FASTA file using biopython
updated 3.6 years ago by
Ram
45k • written 10.8 years ago by
Matt Shirley
10k
1
vote
0
replies
2.1k
views
Comment:
Comment: What is this alignment program? [Pictured]
updated 3.6 years ago by
Ram
45k • written 10.8 years ago by
Matt Shirley
10k
0
votes
1
reply
14k
views
Answer:
A: sra toolkit program fastq-dump question.
10.8 years ago by
Matt Shirley
10k
4
votes
1
reply
14k
views
Answer:
Answer: Extract several sequences from genome in FASTA format with genomic coordinates.
updated 3.6 years ago by
Ram
45k • written 10.8 years ago by
Matt Shirley
10k
1
vote
5
replies
3.7k
views
Color / mark specific sequence bases differently in IGV
SAM
BAM
IGV
updated 3.7 years ago by
Ram
45k • written 11.0 years ago by
Matt Shirley
10k
0
votes
1
reply
7.4k
views
Comment:
Comment: Searching through a multi-fasta file for records containing certain words in the
updated 3.6 years ago by
Ram
45k • written 10.8 years ago by
Matt Shirley
10k
0
votes
0
replies
22k
views
Comment:
Comment: Extract sequence with header from a fasta file with specific ID given in another
updated 3.6 years ago by
Ram
45k • written 10.8 years ago by
Matt Shirley
10k
0
votes
0
replies
22k
views
Comment:
Comment: Extract sequence with header from a fasta file with specific ID given in another
updated 3.6 years ago by
Ram
45k • written 10.8 years ago by
Matt Shirley
10k
0
votes
0
replies
2.8k
views
Comment:
C: Get genotype from reference fasta
10.8 years ago by
Matt Shirley
10k
1
vote
1
reply
2.8k
views
Comment:
Comment: Get genotype from reference fasta
updated 3.6 years ago by
Ram
45k • written 10.8 years ago by
Matt Shirley
10k
0
votes
1
reply
6.1k
views
Comment:
Comment: On the utility of publishing a tool paper
updated 3.7 years ago by
Ram
45k • written 10.8 years ago by
Matt Shirley
10k
0
votes
0
replies
3.3k
views
Comment:
Comment: Genome data on hadoop chromosome level
updated 3.6 years ago by
Ram
45k • written 10.8 years ago by
Matt Shirley
10k
0
votes
0
replies
2.8k
views
Comment:
Comment: Get genotype from reference fasta
updated 3.6 years ago by
Ram
45k • written 10.8 years ago by
Matt Shirley
10k
0
votes
1
reply
9.6k
views
Comment:
C: extract sequences from multi fasta using partial ID
10.9 years ago by
Matt Shirley
10k
0
votes
0
replies
3.4k
views
Comment:
Comment: Non-standard nucleotides in my fast converted from a bam
updated 3.6 years ago by
Ram
45k • written 10.9 years ago by
Matt Shirley
10k
1
vote
2
replies
3.4k
views
Answer:
Answer: Non-standard nucleotides in my fast converted from a bam
updated 3.6 years ago by
Ram
45k • written 10.9 years ago by
Matt Shirley
10k
0
votes
1
reply
6.1k
views
Comment:
Comment: On the utility of publishing a tool paper
updated 3.7 years ago by
Ram
45k • written 10.9 years ago by
Matt Shirley
10k
0
votes
0
replies
6.1k
views
Comment:
Comment: On the utility of publishing a tool paper
updated 3.7 years ago by
Ram
45k • written 10.9 years ago by
Matt Shirley
10k
13
votes
23
replies
6.1k
views
9 follow
Forum:
On the utility of publishing a tool paper
poll
publishing
updated 3.7 years ago by
Ram
45k • written 10.9 years ago by
Matt Shirley
10k
1
vote
0
replies
7.5k
views
Answer:
Answer: How to extract contigs from FASTA file which contains specific sequence
updated 3.7 years ago by
Ram
45k • written 10.9 years ago by
Matt Shirley
10k
1
vote
1
reply
3.3k
views
Comment:
Comment: Transform smallRNA SRA (Illumina) sequences to FASTA
updated 3.7 years ago by
Ram
45k • written 10.9 years ago by
Matt Shirley
10k
0
votes
1
reply
3.3k
views
Comment:
Comment: Transform smallRNA SRA (Illumina) sequences to FASTA
updated 3.7 years ago by
Ram
45k • written 10.9 years ago by
Matt Shirley
10k
0
votes
1
reply
6.1k
views
Comment:
C: On the utility of publishing a tool paper
10.9 years ago by
Matt Shirley
10k
696 results • Page
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