User: JJ Gao
JJ Gao • 50
- Reputation:
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- Location:
- United States/New York/MSKCC
- Last seen:
- 2 years, 2 months ago
- Joined:
- 5 years, 10 months ago
- Email:
- j************@gmail.com
Posts by JJ Gao
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... I was looking for something similar and found Duplicated Genes Database: http://dgd.genouest.org/... in case this is useful for others. ...
written 2.2 years ago by
JJ Gao • 50
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... Sorry I wasn't clear. I meant the BioDas project: www.biodas.org. (I have edited my question to make it clear.) ...
written 2.6 years ago by
JJ Gao • 50
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... Does anyone know the status of the [DAS project](www.biodas.org)? I Googled around and couldn't find many activities around it?
We are interested in supporting DAS-type of distributed API and thought DAS would be a perfect fit, but we would like to know if the project is actively maintained. If no ...
written 2.6 years ago by
JJ Gao • 50
• updated
2.6 years ago by
Pierre Lindenbaum ♦ 133k
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... The odds ratio are calculated based on the query performed, so it's using the same data as in the Oncoprint tab. Only non-silent mutations are currently supported in cBioPortal. Most of the patients in cBioPortal, especially TCGA, have only one sample. Some studies contains patients with multiple sa ...
written 5.2 years ago by
JJ Gao • 50
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Answer:
A: question about CBioprtal
... When querying 2 or more studies, cBioPortal only support mutaiton and CNA. After selecting one cancer study, you would see expression profile if available for the selected study. However, most of the expression z-score profiles are calculated based on a reference population of tumor samples. Normal ...
written 5.2 years ago by
JJ Gao • 50
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...
There is some technical issues for downloading large PDF files, please use SVG and convert to PDF using tools such as Adobe Illustrator.
There is no functions for sorting genes on cBioPortal. I would suggest to get the percentage first and then copy the results of alteration percentages per gene ...
written 5.9 years ago by
JJ Gao • 50
Latest awards to JJ Gao
Scholar
5.9 years ago,
created an answer that has been accepted.
For A: Sorting the cbioportal web output of oncoprint based on frequency percentage
Teacher
5.9 years ago,
created an answer with at least 3 up-votes.
For A: Sorting the cbioportal web output of oncoprint based on frequency percentage
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